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bioRxiv · 10.1101/2020.08.06.236117

Genomic investigation of a suspected multi-drug resistant Klebsiella pneumoniae outbreak in a neonatal care unit in sub-Saharan Africa

Cornick, J. E.·Musicha, P.·Peno, C.·Saeger, E.·Iroh-Tam, P.-Y.·Bennett, A.·Kennedy, N.·Feasey, N.·Heniz, E.·Cain, A. K.
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Abstract

A suspected outbreak of multi-drug resistant (MDR) Klebsiella pneumoniae in a Malawian neonatal unit was investigated using whole-genome sequencing. Strain-types, virulence and resistance genes of K. pneumoniae isolated from patients from the hospital over a four-year period were identified. A MDR ST340 clone was implicated as the likely outbreak cause.

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Cornick, J. E., Musicha, P., Peno, C., Saeger, E., Iroh-Tam, P.-Y., Bennett, A., Kennedy, N., Feasey, N., Heniz, E., Cain, A. K.. 2020-08-07. Genomic investigation of a suspected multi-drug resistant Klebsiella pneumoniae outbreak in a neonatal care unit in sub-Saharan Africa. https://doi.org/10.1101/2020.08.06.236117

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