High concordance between hippocampal transcriptome of the intraamygdala kainic acid model and human temporal lobe epilepsy

Conte, G.; Parras, A.; Alves, M.; Olla, I.; de Diego-Garcia, L.; Beamer, E.; Alalqam, R.; Ocampo, A.; Mendez, R.; Lucas, J. J.; Engel, T.

doi:10.1101/2020.05.12.092338

bioRxiv · 10.1101/2020.05.12.092338

High concordance between hippocampal transcriptome of the intraamygdala kainic acid model and human temporal lobe epilepsy

Conte, G.·Parras, A.·Alves, M.·Olla, I.·de Diego-Garcia, L.·Beamer, E.·Alalqam, R.·Ocampo, A.·Mendez, R.·Lucas, J. J.·Engel, T.

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Abstract

ObjectivePharmacoresistance and the lack of disease-modifying actions of current anti-seizure drugs persist as major challenges in the treatment of epilepsy. Experimental models of chemoconvulsant-induced status epilepticus remain the models of choice to discover potential anti-epileptogenic drugs but doubts remain as to the extent to which they model human pathophysiology. The aim of the present study was to compare the molecular landscape of the intraamygdala kainic acid model of status epilepticus in mice with findings in resected brain tissue from patients with drug-resistant temporal lobe epilepsy (TLE). MethodsStatus epilepticus was induced via intraamygdala microinjection of kainic acid in C57BL/6 mice and gene expression analysed via microarrays in hippocampal tissue at acute and chronic time-points. Results were compared to reference datasets in the intraperitoneal pilocarpine and intrahippocampal kainic acid model and to human resected brain tissue (hippocampus and cortex) from patients with drug-resistant TLE. ResultsIntraamygdala kainic acid injection in mice triggered extensive dysregulation of gene expression which was [~]3-fold greater shortly after status epilepticus (2729 genes) when compared to epilepsy (412). Comparison to samples of patients with TLE revealed a particular high correlation of gene dysregulation during established epilepsy. Pathway analysis found suppression of calcium signalling to be highly conserved across different models of epilepsy and patients. CREB was predicted as one of the main up-stream transcription factors regulating gene expression during acute and chronic phases and inhibition of CREB reduced seizure severity in the intraamygdala kainic acid model. SignificanceOur findings suggest the intraamygdala kainic acid model faithfully replicates key molecular features of human drug-resistant temporal lobe epilepsy and provides potential rationale target approaches for disease-modification through new insights into the unique and shared gene expression landscape in experimental epilepsy. Key point boxO_LIMore genes show expression changes shortly following intraamygdala kainic acid-induced status epilepticus when compared to established epilepsy. C_LIO_LIThe intraamygdala kainic acid mouse model mimics closely the gene expression landscape in the brain of patients with temporal lobe epilepsy. C_LIO_LISupressed calcium signalling in the brain as common feature across experimental models of epilepsy and patients with temporal lobe epilepsy. C_LIO_LICREB is a major up-stream transcription factor during early changes following status epilepticus and once epilepsy is established. C_LI

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Conte, G., Parras, A., Alves, M., Olla, I., de Diego-Garcia, L., Beamer, E., Alalqam, R., Ocampo, A., Mendez, R., Lucas, J. J., Engel, T.. 2020-05-14. High concordance between hippocampal transcriptome of the intraamygdala kainic acid model and human temporal lobe epilepsy. https://doi.org/10.1101/2020.05.12.092338

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