Reusable and Sensitive Detection Method for Exonuclease III Activity by DNB Nanoarrays Based on cPAS Sequencing Technology

Chen, Y.; Wang, H.; Yang, J.; Yang, H.; Drmanac, R.; Xu, C.; Zhang, W.

doi:10.1101/2020.03.24.002956

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bioRxiv · 10.1101/2020.03.24.002956

Reusable and Sensitive Detection Method for Exonuclease III Activity by DNB Nanoarrays Based on cPAS Sequencing Technology

Chen, Y.·Wang, H.·Yang, J.·Yang, H.·Drmanac, R.·Xu, C.·Zhang, W.

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Abstract

AbstractionIn this article, we have designed a sensitive and recycled DNB (DNA nanoball) nanoarrays sequencing complex structures based on BGISEQ-500RS sequencer for the monitoring performance of Exo III activity. In the shortage of Exo III, the effective number ratio of DNB would be captured by an optical system due to one fluorescent. In contrast, in the presence of Exo III, some DNB would disappear or discard from the fields of the optical system by fluorescence extinction and uncleaned fluorescent, respectively. As a result, the effective number of DNB of this strategy was relative to the concentration of Exo III. For Exo III, our strategy showed a highly sensitive linear response in the low detection range of 0.01 U/mL to 0.5 U/mL, with detection limits below 0.01 U/mL. With the comparison between DNB nanoarrays and other fluorescent sensors, this study possessed superior sensitivity, selectivity, and reusability, accompanying with the low cost and simple setup.

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Chen, Y., Wang, H., Yang, J., Yang, H., Drmanac, R., Xu, C., Zhang, W.. 2020-03-25. Reusable and Sensitive Detection Method for Exonuclease III Activity by DNB Nanoarrays Based on cPAS Sequencing Technology. https://doi.org/10.1101/2020.03.24.002956

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