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bioRxiv · 10.1101/2020.03.18.997197

Computational vaccinology based development of multi-epitope subunit vaccine for protection against the Norovirus infections

Ahmad, I.·Ali, S. S.·Shah, I.·Khan, S.·Khan, M.·Ullah, S.·Ali, S.·Khan, J.·Ali, M.·Khan, A.·Wei, D.-Q.
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Abstract

Human Norovirus belong to family Calciviridae, it was identified in the outbreak of gastroenteritis in Norwalk, due to its seasonal prevalence known as "winter vomiting disease". Treatment of Norovirus infection is still mysterious because there is no effective antiviral drugs or vaccine developed to protect against the infection, to eradicate the infection an effective vaccine should be developed. In this study capsid protein (A7YK10), small protein (A7YK11) and polyprotein (A7YK09) were utilized. These proteins were subjected to B and T cell epitopes prediction by using reliable immunoinformatics tools. The antigenic and non-allergenic epitopes were selected for subunit vaccine, which can activate cellular and humoral immune responses. Linkers joined these epitopes together. The vaccine structure was modelled and validated by using Errat, ProSA and rampage servers. The modelled vaccine was docked with TLR-7. Stability of the docked complex was evaluated by MD simulation. In order to apply the concept in a wet lab, the reverse translated vaccine sequence was cloned in pET28a (+). The vaccine developed in this study requires experimental validation to ensure its effectiveness against the disease.

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Ahmad, I., Ali, S. S., Shah, I., Khan, S., Khan, M., Ullah, S., Ali, S., Khan, J., Ali, M., Khan, A., Wei, D.-Q.. 2020-03-20. Computational vaccinology based development of multi-epitope subunit vaccine for protection against the Norovirus infections. https://doi.org/10.1101/2020.03.18.997197

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