Search bioRxiv⌕ Search

bioRxiv · 10.1101/181172

Vegetative compatibility groups explain variation in the virulence of Verticillium dahliae on strawberry

Abstract

Verticillium dahliae infection of strawberry (Fragaria x ananassa) is a major cause of disease-induced wilting in soil-grown strawberries across the world. To understand what components of the pathogen are affecting disease expression, the presence of the known effector VdAve1 was screened in a sample of Verticillium dahliae isolates. Isolates from strawberry were found to contain VdAve1 and were divided into two major clades, based upon their vegetative compatibility groups (VCG); no UK strawberry isolates contained VdAve1. VC clade was strongly related to their virulence levels. VdAve1-containing isolates pathogenic on strawberry were found in both clades, in contrast to some recently published findings.\n\nOn strawberry, VdAve1-containing isolates had significantly higher virulence during early infection, which diminished in significance as the infection progressed. Transformation of a virulent non-VdAve1 containing isolate, with VdAve1 was found neither to increase nor decrease virulence when inoculated on a susceptible strawberry cultivar. There are therefore virulence factors that are epistatic to VdAve1 and potentially multiple independent routes to high virulence on strawberry in V. dahliae lineages.\n\nGenome sequencing a subset of isolates across the two VCGs revealed that isolates were differentiated at the whole genome level and contained multiple changes in putative effector content, indicating that different clonal VCGs may have evolved different strategies for infecting strawberry, leading to different virulence levels in pathogenicity tests. It is therefore important to consider both clonal lineage and effector complement as the adaptive potential of each lineage will differ, even if they contain the same race determining effector.

Source connections

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Fan, R., Cockerton, H., Armitage, A. D., Bates, H., Cascant-Lopez, E., Antanaviciute, L., Xu, X., Hu, X., Harrison, R. J.. 2017-08-29. Vegetative compatibility groups explain variation in the virulence of Verticillium dahliae on strawberry. https://doi.org/10.1101/181172

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related preprints

Photosynthesis-derived carbohydrate supply sustains CuCl2-induced phytoalexin production in rice leaves

Phytoalexins are antimicrobial metabolites whose biosynthesis is triggered by signaling activated by both biotic and abiotic elicitors, but the physiological conditions that sustain their production remain poorly understood. Here, we examined how light and carbohydrate availability affect CuCl2-induced production of diterpenoid (phytocassanes and momilactones) and flavonoid (sakuranetin) phytoalexins in rice (Oryza sativa L.) leaf disks. Darkness strongly suppressed both the accumulation of all three phytoalexin groups and the induction of their biosynthetic genes. In darkness, endogenous sucrose, glucose, and fructose declined to 3%-8% of the levels in the light, whereas early accumulation of jasmonic acid and jasmonoyl-L-isoleucine (JA-Ile) was not detectably reduced. Exogenous sucrose restored phytoalexin accumulation in darkness in a dose-dependent manner, together with the expression of the suppressed biosynthetic genes, whereas equimolar mannitol had no effect. Glucose also restored sakuranetin accumulation in darkness but only partially restored diterpenoid accumulation, whereas the glucose analog 2-deoxy-D-glucose did not, and it suppressed CuCl2-induced accumulation in the light in a dose-dependent manner. In the light, 3-(3,4-dichlorophenyl)-1,1-dimethylurea (DCMU), an inhibitor of photosynthetic electron transport, depleted soluble sugars and suppressed phytoalexin accumulation, and sucrose reversed this suppression. Sugars alone induced little phytoalexin accumulation, indicating that carbohydrates act permissively rather than as elicitors. Diterpenoid phytoalexins depended more strongly on light than sakuranetin, yet both classes depended on carbohydrate availability. These results indicate that photosynthesis-derived carbohydrate supply sustains elicitor-induced phytoalexin production in rice leaves and largely accounts for its light dependence.

plant biology↗

Transcriptome analysis provides insights into candidate genetic regulators of birch response to salt stress

Abstract Background: Soil salinization is a worldwide matter of concern and can result in a series of agricultural and ecological problems. Previous transcriptome data have shown genetic regulatory mechanisms of salt stress response in a salt-tolerant species of Betula halophila and a salt-sensitive species of B. platyphylla, but comparative analysis of transcriptional changes in the the two species remains limited. Aims: We compared gene expression in leaves of B. halophila and leaves and roots of B. platyphylla. Methods: Differentially expressed genes (DEGs) were identified after 24 h of salt stress, followed by Gene Ontology enrichment and gene regulatory network (GRN) construction. Selected DEGs were examined by quantitative real-time PCR (RT-qPCR). Results: Compared with 0 h, 956 DEGs were found in B. halophila leaves (BHLeaf), 2,955 in B. platyphylla leaves (BPLeaf), and 3,827 in B. platyphylla roots (BPRoot). BHLeaf DEG expression patterns were similar to those of BPRoot. DEGs from BHLeaf and BPRoot were enriched in cell wall organization or biogenesis, whereas hormone biosynthesis and signaling genes were altered mainly in B. platyphylla. RT-qPCR showed that selected DEGs were induced by 200 mM NaCl for 24 h in B. platyphylla. Conclusions: Our work uncovered genetic mechanisms of salt stress response commonly and uniquely occurring in two birch species and provides resources for breeding salt-tolerant birch.

plant biology↗

Minimal requirements and evolution of polar membrane targeting in the land plant SOSEKI protein family

Accurate spatial distribution of polar proteins is essential for cell function, but mechanisms underlying polar protein targeting in plants are poorly understood. Here, we dissect the molecular mechanisms underlying the polar targeting of the SOSEKI1 (SOK1) protein in Arabidopsis thaliana. Using extensive mutagenesis and truncation analyses of the polarity domain, we mapped the minimal polarity fragment necessary and sufficient for stable polar targeting to a 25-amino-acid region. This region likely forms an amphipathic helix, and mutations reveal that both its polar and apolar faces are essential for membrane association and polarity. Using phylogenetic analysis, we reconstruct the evolutionary history of the minimal polar targeting region across land plants. Using cross-species expression and protein localization, we infer the ancestral polar SOK localization pattern and show how it remained remarkably conserved, only to diversify upon gene duplication. This work identifies a polar targeting peptide in plants, reveals a mechanism for polar membrane targeting of a plant protein family, and demonstrates both conservation and diversification within this family.

plant biology↗