MicroRNAs from the parasitic plant Cuscuta campestris target host messenger RNAs

Shahid, S.; Kim, G.; Johnson, N. R.; Wafula, E.; Wang, F.; Coruh, C.; Bernal-Galeano, V.; dePamphilis, C. W.; Westwood, J. H.; Axtell, M.

doi:10.1101/180497

bioRxiv · 10.1101/180497

MicroRNAs from the parasitic plant Cuscuta campestris target host messenger RNAs

Shahid, S.·Kim, G.·Johnson, N. R.·Wafula, E.·Wang, F.·Coruh, C.·Bernal-Galeano, V.·dePamphilis, C. W.·Westwood, J. H.·Axtell, M.

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Abstract

First paragraphDodders (Cuscuta spp.) are obligate parasitic plants that obtain water and nutrients from the stems of host plants via specialized feeding structures called haustoria. Dodder haustoria facilitate bi-directional movement of viruses, proteins, and mRNAs between host and parasite1, but the functional effects of these movements are not clear. Here we show that C. campestris haustoria accumulate high levels of many novel microRNAs (miRNAs) while parasitizing Arabidopsis thaliana hosts. Many of these miRNAs are 22 nts long, a usually rare size of plant miRNA associated with amplification of target silencing through secondary small interfering RNA (siRNA) production2. Several A. thaliana mRNAs are targeted by C. campestris 22 nt miRNAs during parasitism, resulting in mRNA cleavage, secondary siRNA production, and decreased mRNA accumulation levels. Hosts with mutations in two of the targets supported significantly higher growth of C. campestris. Homologs of target mRNAs from diverse plants also have predicted target sites to induced C. campestris miRNAs, and the same miRNAs are expressed and active against host targets when C. campestris parasitizes a different host, Nicotiana benthamiana. These data show that C. campestris miRNAs act as trans-species regulators of host gene expression, and suggest that they may act as virulence factors during parasitism.

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Shahid, S., Kim, G., Johnson, N. R., Wafula, E., Wang, F., Coruh, C., Bernal-Galeano, V., dePamphilis, C. W., Westwood, J. H., Axtell, M.. 2017-08-25. MicroRNAs from the parasitic plant Cuscuta campestris target host messenger RNAs. https://doi.org/10.1101/180497

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