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bioRxiv · 10.1101/162701

Sequanix: A Dynamic Graphical Interface for Snakemake Workflows

Desvillechabrol, D.·Legendre, R.·Rioualen, C.·Bouchier, C.·van Helden, J.·Kennedy, S.·Cokelaer, T.
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Abstract

SummaryWe designed a PyQt graphical user interface - Sequanix - aiming at democratizing the use of Snakemake pipelines. Although the primary goal of Sequanix was to facilitate the execution of NGS Snakemake pipelines available in the Sequana project (http://sequana.readthedocs.io), it can also handle any Snakemake pipelines. Therefore, Sequanix should be useful to all Snakemake developers willing to expose their pipelines to a wider audience.\n\nAvailabilitySource code available on http://github.com/sequana/sequana and standalone on http://bioconda.github.io (sequana package).

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Desvillechabrol, D., Legendre, R., Rioualen, C., Bouchier, C., van Helden, J., Kennedy, S., Cokelaer, T.. 2017-07-12. Sequanix: A Dynamic Graphical Interface for Snakemake Workflows. https://doi.org/10.1101/162701

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