Search bioRxiv⌕ Search

bioRxiv · 10.1101/086728

Balance of microtubule stiffness and cortical tension determines the size of blood cells with marginal band across species

Abstract

The fast blood stream of animals is associated with large shear stresses. Consequently, blood cells have evolved a special morphology and a specific internal architecture allowing them to maintain their integrity over several weeks. For instance, non-mammalian red blood cells, mammalian erythroblasts and platelets have a peripheral ring of microtubules, called the marginal band, that flattens the overall cell morphology by pushing on the cell cortex. In this article, we model how the shape of these cells stems from the balance between marginal band elasticity and cortical tension. We predict that the diameter of the cell scales with the total microtubule polymer, and verify the predicted law across a wide range of species. Our analysis also shows that the combination of the marginal band rigidity and cortical tension increases the ability of the cell to withstand forces without deformation. Finally, we model the marginal band coiling that occurs during the disc-to-sphere transition observed for instance at the onset of blood platelet activation. We show that when cortical tension increases faster than crosslinkers can unbind, the marginal band will coil, whereas if the tension increases slower, the marginal band may shorten as microtubules slide relative to each other.\n\nSignificance StatementMany blood cells have a discoidal shape, which is essential for them to function properly within the organism. For some cells, such as blood platelets, this shape is due to the interplay between the elasticity of the marginal band, which is a closed ring of stiff filaments called microtubules, and the tension of the cell cortex, a polymer scaffold associated with the plasma membrane. Dmitrieff et al. examined how cell size is determined by the mechanical balance between these two components. Remarkably, the theory is confirmed over nearly three orders of magnitudes, by data collected from 25 species. The theory also shows how the composite structure is adapted to resist transient mechanical challenges, as encountered in the blood stream.

Source connections

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Dmitrieff, S., Alsina, A., Mathur, A., Nedelec, F.. 2016-11-09. Balance of microtubule stiffness and cortical tension determines the size of blood cells with marginal band across species. https://doi.org/10.1101/086728

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related preprints

Low-pass filtering revisited: ramped phase randomization for cryo-EM map comparison and data augmentation

Conventional low-pass filters attenuate or remove high-frequency Fourier amplitudes but leave the phases intact wherever the amplitude response stays above zero. As a result, fine-scale detail of the original signal can persist beyond the target resolution. A sharp cutoff removes this detail but produces ringing artifacts. To address both limitations, this work introduces ramped phase randomization, which extends a conventional low-pass filter by adding random offsets to Fourier phases that increase smoothly with spatial frequency. For cryo-EM maps, the correlation between a map at the target resolution and an ideal, noiseless map sets the levels of the phase offsets, with a correction for the finite resolution of the input map. On three published map pairs, ramped phase filtering reduced the higher resolution parent's fine detail to a level similar to that of independently determined maps at the lower target resolution, whereas amplitude-only filtering kept the parent's sharp features. The FSCs between the filtered maps and their parents closely resembled those of the experimental maps. The same filter also serves as a data augmentation approach for neural network-based machine learning. With ramped phase randomization, each augmented copy keeps the power spectrum and low-frequency content of the original example but has a different high-frequency pattern. For simulated CryoBench particles of 16 ribosome assembly states, phase augmentation raised mean test accuracy in all 20 combinations of training-set size and latent dimension, by 20.8 percentage points on average (range from 3.3 points to 44.2 points). On two general deep learning benchmarks, mean test accuracy rose from 92.15% to 96.99% with 60 labelled UCI Synthetic Control traces and from 53.44% to 74.27% with 500 labelled noisy MNIST images. The ramped phase randomization is implemented in an open-source Python package, with a companion browser application for interactive visualization of cryo-EM maps and filtering effects.

biophysics↗

Kinetic gating by an iron sulfur chain modulates flavin radical-pair spin chemistry in mitochondrial Complex I

Mitochondrial Complex I generates reactive oxygen species at its flavin cofactor, where spin dependent reaction pathways have been proposed. Models of this chemistry treat the flavin oxygen radical pair in isolation, although the flavin is wired to a chain of eight iron sulfur clusters. Here we model the pair with this chain using the human Complex I structure and open quantum system models of spin coupling and electron transfer. In the simulated network, spin coherence decays rapidly along the chain, whereas proximal clusters alter the calculated radical-pair singlet yield. Their influence is kinetically gated: a downstream cluster affects the modelled yield when its electron-transfer rate competes with radical pair recombination, a threshold robust to driving force and to the transfer model. Modelling does set the sign: one directional spin hops predict suppression and inflate coherence transport, whereas charge resolved transfer drives the singlet yield towards its spin-randomized limit unless triplet recombination dominates. Detectable spin dependent effects in this framework require superoxide spin relaxation to be substantially slower than in free solution, a condition not yet established for Complex I.

biophysics↗

Semidilute Polymer Scaling Controls PEG-induced Protein Phase Separation

When does polyethylene glycol (PEG) mass concentration provide a common measure of crowding strength across polymer chain lengths? Here we use bovine serum albumin (BSA) and PEG as a controlled depletion system and measure both coexisting phases to determine binodals, tie lines, and critical points across PEG molecular weights of 4--100 kDa. Phase diagrams for PEG 20, 35, and 100 kDa approximately collapse in mass-concentration coordinates, consistent with semidilute polymer scaling. Generalized free volume theory (GFVT) describes the BSA binodals and tie lines. It also approximately describes binodals for three additional globular proteins in PEG 35K, extending the comparison across proteins spanning 7.2--66.4 kDa. For the binary PEG mixtures tested, GFVT approximates the binodals using an effective polymer size corresponding to the weight-average molecular weight. These results identify a regime in which PEG mass concentration (g/L) provides a transferable measure of depletion-induced crowding.

biophysics↗