Latent developmental and evolutionary shapes embedded within the grapevine leaf

Daniel H Chitwood; Laura L Klein; Regan O'Hanlon; Steven Chacko; Matthew Greg; Cassandra Kitchen; Allison J Miller; Jason P Londo

doi:10.1101/018291

bioRxiv · 10.1101/018291

Latent developmental and evolutionary shapes embedded within the grapevine leaf

Daniel H Chitwood·Laura L Klein·Regan O'Hanlon·Steven Chacko·Matthew Greg·Cassandra Kitchen·Allison J Miller·Jason P Londo

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Abstract

O_LIAcross plants, leaves exhibit profound diversity in shape. As a single leaf expands, its shape is in constant flux. Plants may also produce leaves with different shapes at successive nodes. Additionally, leaf shape varies among individuals, populations, and species due to evolutionary processes and environmental influences.\nC_LIO_LIBecause leaf shape can vary in many different ways, theoretically the effects of distinct developmental and evolutionary processes are separable, even within the shape of a single leaf. Here, we measure the shapes of >3,200 leaves representing >270 vines from wild relatives of domesticated grape (Vitis spp.) to determine if leaf shapes attributable to genetics and development are separable from each other.\nC_LIO_LIWe isolate latent shapes (multivariate signatures that vary independently from each other) embedded within the overall shape of leaves. These latent shapes can predict developmental stages independent from species identity and vice versa. Shapes predictive of development are then used to stage leaves from 1,200 varieties of domesticated grape (Vitis vinifera), revealing that changes in timing underlie leaf shape diversity.\nC_LIO_LIOur results indicate distinct latent shapes combine to produce a composite morphology in leaves, and that developmental and evolutionary contributions to shape vary independently from each other.\nC_LI

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Daniel H Chitwood, Laura L Klein, Regan O'Hanlon, Steven Chacko, Matthew Greg, Cassandra Kitchen, Allison J Miller, Jason P Londo. 2015-04-21. Latent developmental and evolutionary shapes embedded within the grapevine leaf. https://doi.org/10.1101/018291

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