@misc{indiciae65fb590b1d83, title = {Typhi Mykrobe: fast and accurate lineage identification and antimicrobial resistance genotyping directly from sequence reads for the typhoid fever agent Salmonella Typhi}, author = {Ingle, D. J. and Hawkey, J. J. and Hunt, M. and Iqbal, Z. and Keane, J. and Afolayan, A. O. and Ahmed, N. and Andleeb, S. and Ashton, P. M. and Bogoch, I. I. and Carey, M. E. and Chattaway, M. A. and Crump, J. A. and Guevara, P. D. and Howden, B. and Izumiya, H. and Jacob, J. J. and Judd, L. M. and Kapil, A. and Keddy, K. H. and Kim, J. and Levine, M. M. and Morita, M. and Nair, S. and Octavia, S. and Okeke, I. N. and Osadebamwen, P. and Rahman, S. I. A. and Rokney, A. and Rasko, D. and Shamanna, V. and Sikorski, M. J. and Smith, A. M. and Sunmonu, G. T. and Tagg, K. A. and Wick, R. R. and Dyson, Z. A. and Holt, K. and Global Typhoid Genomics Consortium,}, year = {2024}, doi = {10.1101/2024.09.30.613582}, url = {https://www.biorxiv.org/content/10.1101/2024.09.30.613582v1}, note = {Source identifier: 10.1101/2024.09.30.613582} }