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van der Spek, A. N.

Publications and source records attributed to van der Spek, A. N..

2 recordsLinked to original sources

Highly pathogenic avian influenza A H5 virus outbreaks in broiler farms in the Netherlands. Clinical signs, transmission and identification of reporting thresholds.

BackgroundFor a successful control of highly pathogenic avian influenza virus (HPAIV) epidemics in poultry, early detection is key and it is mostly dependent on the farmers prompt identification of disease and reporting suspicions. The latter could be further improved by providing references to farmers for triggering suspicions. MethodsHere we report observations on clinical signs of HPAIV H5N1 and H5N8 infected broiler farms in the Netherlands and analyze their daily mortality and feed and water intake data in order to identify thresholds for reporting suspicions. In addition, mortality data was used to characterize the transmissibility of these viruses, which could help estimate how fast infection spreads within the flock and when infection was likely introduced. ResultsThe most frequently observed clinical signs in affected flocks were sudden increase in mortality, cyanosis of wattles comb and/or legs and hemorrhagic conjunctiva. Analysis of mortality data indicate that daily mortality higher than 0.17% is an effective threshold for reporting a HPAIV-suspicion. Reliable thresholds for food or water intake could not be stablished. The estimated within-flock transmission rates ranged from 1.1 to 2.0 infections caused by one infectious broiler chicken per day. ConclusionsWe identified effective mortality thresholds for reporting suspicions of HPAIV infections. The estimated transmission rates appear to indicate a slow progression of a H5 HPAIV outbreak in affected broiler flocks. The information here provided can be used to improve syndromic surveillance and guide outbreak response.

microbiology↗

Adaptation, spread and transmission of SARS-CoV-2 in farmed minks and related humans in the Netherlands

In the first wave of the COVID-19 pandemic (April 2020), SARS-CoV-2 was detected in farmed minks and genomic sequencing was performed on mink farms and farm personnel. Here, we describe the outbreak and use sequence data with Bayesian phylodynamic methods to explore SARS-CoV-2 transmission in minks and related humans on farms. High number of farm infections (68/126) in minks and farm related personnel (>50% of farms) were detected, with limited spread to the general human population. Three of five initial introductions of SARS-CoV-2 lead to subsequent spread between mink farms until November 2020. The largest cluster acquired a mutation in the receptor binding domain of the Spike protein (position 486), evolved faster and spread more widely and longer. Movement of people and distance between farms were statistically significant predictors of virus dispersal between farms. Our study provides novel insights into SARS-CoV-2 transmission between mink farms and highlights the importance of combing genetic information with epidemiological information at the animal-human interface.

microbiology↗