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Biology subjects

de Paola, V.

Publications and source records attributed to de Paola, V..

2 recordsLinked to original sources

Altered neuronal network activity and connectivity in human Down Syndrome excitatory cortical neurons

Down syndrome (DS) is the most common genetic cause of intellectual disability, affecting one in 700 live births worldwide, and is caused by trisomy of the human chromosome 21 (Hsa21), yet the cellular and molecular mechanisms driving neuronal network dysfunction remain poorly understood. Here, we investigated whether trisomy 21 (TS21) alters the spontaneous synchronised activity of excitatory neuron networks, potentially contributing to the neurodevelopmental phenotypes of DS. By modelling human cortical development in vitro with TS21 and matched control human iPSCs from two DS donors, we investigated the impact of Hsa21 triplication on neural network activity and connectivity. Calcium imaging revealed an early and pronounced reduction in neuronal activity in TS21 cortical neurons, including a marked loss of synchronised bursting. These deficits persisted up to 80 days in vitro and for over 5 months in vivo following transplantation into the mouse forebrain, as shown by multiphoton calcium imaging through a cranial window. Viral trans-synaptic tracing identified significant reduction of neuronal connectivity in TS21 neuronal networks in vitro, suggesting that reduced network connectivity contributes to the dramatic reduction of synchronised bursting. Furthermore, TS21 neurons displayed significantly reduced expression of voltage-gated potassium channels, with single-neuron recordings confirming a reduction of hyperpolarization-activated currents. Together, these findings demonstrate long-lasting impairments in human cortical excitatory neuron network function associated with Trisomy 21.

neuroscience↗

Activity-induced gene expression and long-range enhancer-promoter contacts in cohesin-deficient neurons

Cohesin and CTCF are major drivers of 3D genome organization, but their role in neurons is still emerging. Here we show a prominent role for cohesin in the expression of genes that facilitate neuronal maturation and homeostasis. Unexpectedly, we observed two major classes of activity-regulated genes with distinct reliance on cohesin in primary cortical neurons. Immediate early genes remained fully inducible by KCl and BDNF, and short-range enhancer-promoter contacts at the Immediate early gene Fos formed robustly in the absence of cohesin. In contrast, cohesin was required for full expression of a subset of secondary response genes characterised by long-range chromatin contacts. Cohesin-dependence of constitutive neuronal genes with key functions in synaptic transmission and neurotransmitter signaling also scaled with chromatin loop length. Our data demonstrate that key genes required for the maturation and activation of primary cortical neurons depend cohesin for their full expression, and that the degree to which these genes rely on cohesin scales with the genomic distance traversed by their chromatin contacts.

genomics↗