Biology subjects

de Guttry, C.

Publications and source records attributed to de Guttry, C..

3 recordsLinked to original sources

bioRxiv2026

ERGA-BGE reference genomes of Hyalomma lusitanicum and its obligate Francisella endosymbiont as a genomic resource for One Health research

Hyalomma lusitanicum is a characteristic tick species of the western Mediterranean region, with a well-established distribution across the Iberian Peninsula. It is strongly associated with wild ungulates, particularly red deer, as well as livestock, to which it can transmit a wide range of pathogens, including viruses, bacteria, and protozoa. Here, we present three genomic resources for H. lusitanicum: a scaffold-scale nuclear genome, the complete mitochondrial genome, and the complete genome of its associated Francisella bacterial endosymbiont. The nuclear genome assembly spans 1.81 Gb and comprises 59 scaffolds, with a scaffold N50 of 153.6 Mb (L50 = 5) and no gaps, indicating high contiguity and completeness with a gene annotation completeness BUSCO score of 97.1 %. Genome annotation of the nuclear assembly identified 20,638 protein-coding genes, 1,422 non-coding genes, and 5,775 pseudogenes. A total of 18 scaffolds were assembled as putative chromosomes, exceeding the 11 chromosomes inferred as ancestral; however, synteny analyses suggest that several scaffolds likely represent fragmented portions of the same chromosome, probably due to incomplete Hi-C scaffolding. Despite this, the assembly represents one of the most complete tick nuclear genomes generated to date. In addition, we report the complete genome of a Francisella endosymbiont (1.51 Mb, 1,679 genes), characterized by a high proportion of pseudogenes and reduced genome size, consistent with patterns of genome reduction associated with obligate symbiosis. Together, these genomic resources provide a framework to investigate local adaptation and host-symbiont evolution, and to support improved surveillance, control, and management strategies for species of public health relevance.

genomics↗

bioRxiv2022

Genomic compatibility excels possible 'good genes' effects of sexual selection in lake char

Mating is rarely random in nature, but the effects of mate choice on offspring performance are still poorly understood. We sampled in total 47 wild lake char (Salvelinus umbla) during two breeding seasons and used their gametes to investigate the genetic consequences of different mating scenarios. In a first study, 1,464 embryos that resulted from sperm competition trials were raised singly in either a stress- or non-stress environment. Offspring growth turned out to be strongly reduced with increased genetic relatedness between the parents while male coloration (that reveal aspects of male health) was no significant predictor of offspring performance. In a second experiment one year later, block-wise full-factorial in vitro breeding was used to produce 3,094 embryos that were raised singly after sublethal exposures to a pathogen or water only. Offspring growth was again strongly reduced with increased genetic relatedness between the parents while male coloration was no significant predictor of offspring performance. We conclude that the genetic benefits of mate choice would be strongest if females avoided genetic similarity, while male breeding colors seem more relevant in intra-sexual selection. Impact SummaryMales and females usually compete for access to mating partners, and they usually choose their mates. Sexual selection is therefore a major force in evolution. It shapes sexual signals and mate preferences depending on the type of mating system. A comparatively simple mating system is when fertilization is external and neither males nor females care for their brood, as is the case in salmonid fish. A group of hypotheses then predicts that female mate preferences have evolved to maximize offspring growth and survival through indirect genetic benefits. There are two types of such indirect benefits. In models of good genes sexual selection, conspicuous signals reveal a males health and vigor because only males in good health can afford these costly traits. Females would then prefer males with strong signals. In compatible genes models, females would instead focus on signals that allow them to complement their own genotype to achieve high offspring viability. An example of the latter is inbreeding avoidance through odors that reveal kinship. We sampled wild lake char to compare the likely consequences of these two types of possible female preferences for offspring growth and survival. We experimentally crossed these fish in vitro and raised large numbers of offspring singly and for several months. Our first experiment revealed that offspring growth would be significantly increased if females would avoid mating with genetically more similar males, while preferring males with strong sexual ornaments (in this case: yellow skin colors) would not improve offspring performance. These results could be confirmed in a second experiment with a larger sample size. We conclude that the genetic benefit of mate choice is largest if females aim for compatible genes rather than focusing on the breeding colors that males display. These breeding colors are therefore likely to play a more important role in other contexts, e.g., in male-male competition.

evolutionary biology↗

bioRxiv2021

Sperm of more colorful males are better adapted to ovarian fluids in lake char (Salmonidae)

Fish often spawn eggs with ovarian fluids that have been hypothesized to support sperm of some males over others (cryptic female choice). Alternatively, sperm reactions to ovarian fluids could reveal male strategies linked to their likely roles during spawning. Sperm of males who would usually be close to females during spawning are then expected to be better adapted to the presence of ovarian fluids than to water only, while the reverse would be expected for males that typically spawn at larger distance to the females. We tested these predictions with gametes and ovarian fluids from wild-caught lake char (Salvelinus umbla). We found that sperm of more colorful males showed increased sperm velocity in diluted ovarian fluids while sperm of paler males were fastest in water only. We then let equal numbers of sperm compete for fertilizations in the presence or absence of ovarian fluids and used microsatellite markers to assign in total 1,464 embryos (from 70 experimental trials) to their fathers. Overall, sperm of more colorful males reached higher fertilization success than sperm of pale males. This difference was enhanced by the presence of ovarian fluids and best explained by the increased sperm velocity. Sperm competitiveness was not enhanced with decreasing genetic distance to a given female, although parallel stress tests on embryos had revealed that females would profit more from mating with least related males rather than most colored ones. We conclude that sperm of more colorful males are best adapted to ovarian fluids, and that the observed reaction norms reveal male strategies rather than cryptic female choice.

evolutionary biology↗