Biology subjects

Zenisek, D.

Publications and source records attributed to Zenisek, D..

7 recordsLinked to original sources

bioRxiv2025

Electrophysiological profiling of exocytosis during early-stage development of the zebrafish lateral line

Hair cells of the zebrafish lateral line have proven to be a good model for studying hair cell function in a system that is easily genetically manipulated, rapidly develops and is experimentally accessible. However, characterization of potential developmental changes, and possible differences along lateral line position are lacking. Here, we used in vivo patch clamp to investigate the electrophysiological and exocytic properties of neuromast hair cells over early development across body location. Long depolarizations led to steady increases in membrane capacitance, presumably due to exocytosis of vesicles localized to ribbon synapses. The magnitude and kinetics of capacitance changes did not vary significantly across the L1 to L6 position of neuromasts along lateral line, but the magnitudes were found to be significantly smaller in hair cells found in the tail region across all developmental time points. For each region, we found no significant changes in capacitance responses between 3 and 7 days after fertilization. Hair cell capacitance responses were greatly reduced in animals injected with CRISPR/Cas9 with gRNAs targeted to otoferlin b. These results confirm the essential role of otoferlin b in neuromast hair cell function, and they establish the fidelity of CRISPR/Cas9 to rapidly mediate genetic removal of critical genes to study their impact on synaptic release.

neuroscience↗

bioRxiv2025

Distinct Roles of CaMKII in Synaptic Vesicle Dynamics at Zebrafish Retinal Rod Bipolar Ribbon Synapses

Calcium (Ca{superscript 2}) not only serves as a fundamental trigger for neurotransmitter release but also participates in shaping neurotransmitter release (NTR) during prolonged presynaptic stimulation via multiple Ca2+-dependent processes. The Ca2+/calmodulin (CaM)-dependent protein kinase II (CaMKII) is enriched at various presynaptic terminals, including ribbon synapses, where it associates with synaptic ribbons and thus may contribute to the modulation of Ca2+-dependent NTR. This could arise via its ability to influence one or more steps that control either the Ca2+ signal, the release process, or synaptic vesicle dynamics affecting available pools. Yet, recent studies have yielded conflicting results regarding the ability of CaMKII to influence NTR at rod bipolar cell (RBC) ribbon synapses. To address this, we acutely manipulated CaMKII activity in synaptic terminals of zebrafish RBCs by infusion of either inhibitory peptides targeting CaMKII or CaM, or a constitutively active CaMKII, while using a combination of imaging and electrophysiological approaches. Neither inhibiting nor enhancing CaMKII activity affects presynaptic Ca2+ channel activity. However, capacitance measurements revealed that inhibition of either CaMKII or CaM reduces exocytosis. CaMKII inhibition also reduces synaptic vesicle replenishment. Surprisingly, elevation of CaMKII activity also diminished vesicle fusion, similar to the effect of CaMKII inhibition, suggesting that CaMKII activity naturally exists at optimal levels to support neurotransmitter release. In contrast to CaMKII inhibition, CaMKII activity elevation did not impair vesicle replenishment. Collectively, these data suggest that distinct synaptic vesicle populations are differentially reliant on the level of CaMKII activity. Significant StatementCaMKII is well-recognized for its postsynaptic participation in multiple forms of synaptic plasticity, yet it is well-documented to be prevalent in presynaptic compartments, where it may control NTR. The specific functions of CaMKII in synaptic vesicle dynamics remain poorly understood. While using a combination of imaging and electrophysiology approaches, we acutely manipulated CaMKII activity in presynaptic terminals by infusion of inhibitory peptides or constitutively active CaMKII. These manipulations revealed that deviations in CaMKII levels, in either direction, impair neurotransmitter release, suggesting that CaMKII is optimally present at these synapses. Yet CaMKII activity appears required for synaptic vesicle replenishment, suggesting that distinct aspects of synaptic vesicle dynamics are under differential control by CaMKII.

neuroscience↗

bioRxiv2024

Nanophysiology Approach Revealed Diversity in Calcium Microdomains in Zebrafish Retinal Bipolar Ribbon Synapses

Rapid and high local calcium (Ca2+) signals are essential for triggering neurotransmitter release from presynaptic terminals. In specialized bipolar ribbon synapses of the retina, these local Ca2+ signals control multiple processes, including the priming, docking, and translocation of vesicles on the ribbon before exocytosis, endocytosis, and the replenishment of release-ready vesicles to the fusion sites for sustained neurotransmission. However, our knowledge about Ca2+ signals along the axis of the ribbon active zone is limited. Here, we used fast confocal quantitative dual-color ratiometric line-scan imaging of a fluorescently labeled ribbon binding peptide and Ca2+ indicators to monitor the spatial and temporal aspects of Ca2+ transients of individual ribbon active zones in zebrafish retinal rod bipolar cells (RBCs). We observed that a Ca2+ transient elicited a much greater fluorescence amplitude when the Ca2+ indicator was conjugated to a ribeye-binding peptide than when using a soluble Ca2+ indicator, and the estimated Ca2+ levels at the ribbon active zone exceeded 26 M in response to a 10-millisecond stimulus, as measured by a ribbon-bound low-affinity Ca2+ indicator. Our quantitative modeling of Ca2+ diffusion and buffering is consistent with this estimate and provides a detailed view of the spatiotemporal [Ca2+] dynamics near the ribbon. Importantly, our data demonstrates that the local Ca2+ levels may vary between ribbons of different RBCs and within the same cells. The variation in local Ca2+ signals is found to correlate with ribbon size and active zone extent. Our serial electron microscopy results provide new information about the heterogeneity in ribbon size, shape, and area of the ribbon in contact with the plasma membrane.

neuroscience↗

bioRxiv2023

Role of Ribeye PXDLS/T-binding cleft in normal synaptic ribbon function

Non-spiking sensory hair cells of the auditory and vestibular systems encode a dynamic range of graded signals with high fidelity by vesicle exocytosis at ribbon synapses. Ribeye, the most abundant protein in the synaptic ribbon, is composed of a unique A domain specific for ribbons and a B-domain nearly identical to the transcriptional corepressor CtBP2. CTBP2 and the B-domain of Ribeye contain a surface cleft that binds to proteins harboring a PXDLS/T peptide motif. Little is known about the importance of this binding site in synaptic function. Piccolo has a well-conserved PVDLT motif and we find that overexpressed Ribeye exhibits striking co-localization with Piccolo in INS-cells, while two separate mutants containing mutations in PXDLS/T-binding region, fail to co-localize with Piccolo. Similarly, co-transfected Ribeye and a piccolo fragment containing the PVDLT region co-localize in HEK cells. Expression of wild-type Ribeye-YFP in zebrafish neuromast hair cells returns electron densities to ribbon structures and mostly rescued normal synaptic transmission and morphological phenotypes in a mutant zebrafish lacking most Ribeye. By contrast, Ribeye-YFP harboring a mutation in the PXDLS/T-binding cleft resulted in ectopic electron dense aggregates that did not collect vesicles and the persistence of ribbons lacking electron densities. Furthermore, overexpression failed to return capacitance responses to normal levels. These results point toward a role for the PXDLS/T-binding cleft in the recruitment of Ribeye to ribbons and in normal synaptic function. Significance statementHair cell synaptic ribbons are evolutionarily conserved structures that appear dense in electron micrographs, extend from the release site into the cytoplasm and tether synaptic vesicles for release. Here, we show that Ribeye, the major component of the synaptic ribbon electron density is directed to ribbons via its PXDLS/T-binding site and that mutant isoforms of Ribeye with point mutations disrupting these interactions fail to rescue normal function in mutant zebrafish lacking most Ribeye.

neuroscience↗

bioRxiv2023

The Effects of Aging on Rod Bipolar Cell Ribbon Synapses

The global health concern posed by age-related visual impairment highlights the need for further research focused on the visual changes that occur during the process of aging. To date, multiple sensory alterations related to aging have been identified, including morphological and functional changes in inner hair cochlear cells, photoreceptors, and retinal ganglion cells. While some age-related morphological changes are known to occur in rod bipolar cells in the retina, their effect on these cells and on their connection to other cells via ribbon synapses remain elusive. To investigate the effects of aging on rod bipolar cells and their ribbon synapses, we compared synaptic calcium currents, calcium dynamics, and exocytosis in zebrafish (Danio rerio) that were middle-aged (MA,18 months) or old-aged (OA, 36 months). The bipolar cell terminal in OA zebrafish exhibited a decreased number of synaptic ribbons, an increased ribbon length, and a decrease in local Ca2+ signals at the tested ribbon location with little change in the overall magnitude of the calcium current or exocytosis in response to brief pulses. Staining of the synaptic ribbons with antibodies specific for PKC revealed shortening of the inner nuclear and plexiform layers (INL and IPL). These findings shed light on age-related changes in the retina that are related to synaptic ribbons and calcium signals.

neuroscience↗

bioRxiv2021

Rapid propagation of membrane tension at a presynaptic terminal

Many cellular activities, such as cell migration1, cell division2,3, signaling4,5, infection6, phagocytosis7 and exo-endocytosis8-11, generate membrane tension gradients that in turn regulate them12. Moreover, membrane flows, which are driven by tension gradients, can limit exo-endocytosis coupling in space and time, as net membrane flow from exocytic to endocytic sites is required to maintain membrane homeostasis13. However, there is controversy over how rapidly plasma membrane flows can relax tension gradients; contrary to the common view12,14,15, recent work showed membrane tension does not equilibrate in several cell types16. Here we show membrane tension can propagate rapidly or slowly, spanning orders of magnitude in speed, depending on cell type. In a neuronal terminal specialized for rapid synaptic vesicle turnover and where exo-endocytosis events occur at distinct loci, membrane tension equilibrates within seconds. By contrast, membrane tension does not propagate in neuroendocrine adrenal chromaffin cells secreting catecholamines. Thus, slow membrane flow and tension equilibration may confine exo- and exocytosis to the same loci17. Stimulation of exocytosis causes a rapid, global decrease in the synaptic terminal membrane tension, which recovers slowly due to endocytosis. Our results demonstrate membrane tension propagates rapidly at neuronal terminals and varies during synaptic activity, likely contributing to exo-endocytosis coupling.

biophysics↗

bioRxiv2020

Direct Observation Of Vesicle Transport On The Synaptic Ribbon Provides Evidence That Vesicles Are Mobilized And Prepared Rapidly For Release

Synaptic ribbons are thought to provide vesicles for continuous synaptic transmission in some retinal non-spiking neurons, yet recent studies indicate that genetic removal of the ribbon has little effect on vesicle release kinetics. To investigate vesicle replenishment at synaptic ribbons, we imaged synaptic vesicles and ribbons in retinal bipolar cells with TIRF microscopy during stimulation with trains of 30-ms depolarizations. Analysis of vesicles released by the stimuli revealed that the vast majority of releasable vesicles reside within 300 nm of the ribbon center. A single 30-ms step to 0 mV was sufficient to deplete the most membrane-proximal vesicle pool, while triggering rapid stepwise movements of distal vesicles along the ribbon and toward the plasma membrane. Replenishment only becomes rate-limiting for recovery from paired-pulse depression for interstimulus intervals shorter than 250 ms. For longer interstimulus intervals, vesicle movement down the ribbon is fast enough to replenish released vesicles, but newly arrived vesicles are not release-ready. Notably, vesicle re-supply is 40-to 50-fold faster than previously measured in non-ribbon conventional synapses, whereas vesicle maturation rate is comparable. Moreover, in contrast to conventional synapses, vesicles docked at the base of the ribbon release with high fidelity. Lastly, our data show that with multiple stimuli, the delay in vesicle departure increases. Our results support a role for ribbons in the rapid supply and efficient preparation of vesicles for release, provide direct measurements of vesicle movement down the synaptic ribbon and suggest that multiple factors contribute to paired-pulse depression.

neuroscience↗