Biology subjects

Zeitzschel, N.

Publications and source records attributed to Zeitzschel, N..

6 recordsLinked to original sources

bioRxiv2026

State-dependent binding of the wedge domain controls inactivation of the mechanosensitive ion channel PIEZO1

The mechanically activated ion channel PIEZO1 transduces membrane tension into intracellular calcium signals and is critical for a wide range of physiological processes. Recent structural and functional studies have established a detailed framework for PIEZO1 activation, but the molecular mechanisms governing its rapid inactivation remain incompletely understood. Here, we examined the contribution of the intracellular wedge domain to PIEZO1 inactivation using site-directed mutagenesis, electrophysiological recordings and MINFLUX nanoscopy. We show that wedge deletion and disruption of specific {pi}-{pi} and cation-{pi} interactions between the wedge 1-helix and the pore module abolishes inactivation without impairing channel activation. Moreover, MINFLUX nanoscopy reveals that the wedge stabilizes a flat inactivated conformation of PIEZO1 and suggests that wedge dissociation is required for recovery from inactivation. Together, our data support a ball-and-chain-like mechanism with the wedge acting as a state-dependent inactivation particle that docks to the pore module to terminate channel activity during sustained mechanical stimulation.

physiology↗

bioRxiv2025

3D-MINFLUX nanoscopy reveals distinct allosteric mechanisms for activation and modulation of PIEZO1 by Yoda1

PIEZO1 underpins numerous physiological processes by which cells detect and respond to mechanical stimuli. The small molecule Yoda1 has become an indispensable tool that is frequently used for dissecting the role of PIEZO1 in physiological and pathological contexts, yet its mode of action remains incompletely understood. Here, using site-directed mutagenesis, electrophysiology, computational modelling and 3D-MINFLUX nanoscopy, we demonstrate that mutation of the previously proposed Yoda1 binding site, solely abolishes Yoda1-induced activation and channel flattening but preserves modulation of mechanically-evoked PIEZO1 currents, whereas mutation of F1715, which lines a transient binding cavity accessible only in the flattened PIEZO1 conformation, eliminated modulation without affecting Yoda-induced calcium entry. Thus, our data support a two-site induced-fit-like mechanism where Yoda first engages binding site-1 to promote blade flattening and pore opening and then transitions to a deeper binding site to modulate the mechanical activation threshold and inactivation kinetics. This revised model distinguishes discrete allosteric pathways for PIEZO1 activation versus modulation and provides a framework for the design of next-generation use-dependent PIEZO1 modulators.

pharmacology and toxicology↗

bioRxiv2024

Cluster nanoarchitecture and structural diversity of PIEZO1 in intact cells

The force-gated ion channel PIEZO1 confers mechanosensitivity to many cell types. While the structure and physiological roles of PIEZO1 are well-described, the subcellular distribution and the impact of the cellular microenvironment on PIEZO1 conformation and function are poorly understood. Here, using MINFLUX nanoscopy we demonstrate that PIEZO1 channels collectively deform the membrane into pit-shaped invaginations, thereby creating mechano-responsive microdomains capable of amplifying mechanical stimuli via subtle changes in their topology. Moreover, by measuring intramolecular distances in individual PIEZO1 channels with nanometer precision, we reveal subcellular compartment-specific differences in PIEZO1 conformation at rest and during activation that correlate with differences in PIEZO1 function and are possibly caused by differences in cytoskeletal architecture. Together, our data provide previously unrecognized insights into the complex interplay of forces that determine how PIEZO1 alters membrane shape and, vice versa, how the membrane together with the cytoskeleton affect the conformation and function of individual PIEZO1 channels. TeaserMINFLUX nanoscopy reveals subcellular distribution and conformational diversity of PIEZO1 channels in intact cells.

cell biology↗

bioRxiv2022

All-optical closed-loop voltage clamp for precise control of muscles and neurons in live animals

Excitable cells can be stimulated or inhibited by optogenetics. Since optogenetic actuation regimes are often static, neurons and circuits can quickly adapt, allowing perturbation, but not true control. Hence, we established an optogenetic voltage-clamp (OVC). The voltage-indicator QuasAr2 provides information for fast, closed-loop optical feedback to the bidirectional optogenetic actuator BiPOLES. Voltage-dependent fluorescence is held within tight margins, thus clamping the cell to distinct potentials. We established the OVC in muscles and neurons of Caenorhabditis elegans, and transferred it to rat hippocampal neurons in slice culture. Fluorescence signals were calibrated to electrically measured potentials, and wavelengths to currents, enabling to determine optical I/V-relationships. The OVC reports on homeostatically altered cellular physiology in mutants and on Ca2+-channel properties, and can dynamically clamp spiking. Combining non-invasive imaging with control capabilities of electrophysiology, the OVC facilitates high-throughput, contact-less electrophysiology in individual cells and paves the way for true optogenetic control in behaving animals.

neuroscience↗

bioRxiv2022

The molecular mechanism and physiological role of silent nociceptor activation

Silent nociceptors are sensory afferents that are insensitive to noxious mechanical stimuli under normal conditions but become sensitized to such stimuli during inflammation. Using RNA-sequencing and quantitative RT-PCR we demonstrate that inflammation selectively upregulates the expression of the transmembrane protein TMEM100 in silent nociceptors and electrophysiology revealed that over-expression of TMEM100 is required and sufficient to un-silence silent nociceptors. Moreover, we show that mice lacking TMEM100 do not develop secondary allodynia - i.e. pain hypersensitivity that spreads beyond the site of inflammation - in a mouse model of knee joint inflammation and that AAV-mediated overexpression of TMEM100 in articular afferents in the absence of inflammation is sufficient to induce allodynia in remote skin regions without causing knee joint pain. Thus, our work identifies TMEM100 as a key regulator of silent nociceptor un-silencing and reveals a physiological role for this hitherto enigmatic afferent subclass in triggering spatially remote secondary allodynia during inflammation.

neuroscience↗

bioRxiv2020

BiPOLES: a tool for bidirectional dual-color optogenetic control of neurons

Optogenetic manipulation of neuronal activity has become an indispensable experimental strategy in neuroscience research. A large repertoire of excitatory and inhibitory tools allows precise activation or inhibition of genetically targetable neuronal populations. However, an optogenetic tool for reliable bidirectional control of neuronal activity allowing both up- and downregulation of the same neurons in a single experiment is still missing. Here we report BiPOLES, an optogenetic tool for potent excitation and inhibition of the same population of neurons with light of two different colors. BiPOLES consists of an inhibitory, blue-light-sensitive anion-conducting channelrhodopsin fused to an excitatory, red-light-sensitive cation-conducting channelrhodopsin in a single, trafficking-optimized tandem protein. BiPOLES enables multiple new applications including potent dual-color spiking and silencing of the same neurons in vivo and dual-color optogenetic control of two independent neuronal populations.

neuroscience↗