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Biology subjects

ZHANG, D.

Publications and source records attributed to ZHANG, D..

3 recordsLinked to original sources

Molecular atlas of key food odorants reveals structured aroma organization and enables generative aroma design

Food aromas arise from complex combinations of odorants, yet how these combinations are organized across foods to define aroma identity remains unclear. Decoding this "aroma code" could help bridge the sensory gap between traditional foods and sustainable alternatives, which often struggle with off-notes or to replicate consumer-expected flavor profiles. Here we present KFO-Atlas, a molecular atlas of 896 key food odorants curated from 2,282 food aroma formulations. Analysis shows that food aromas are built from sparse and structured sets of odorants. Plant-derived foods span a broad and diverse aroma space, whereas animal-derived foods tend to exhibit more similar odorant sets. In specific cases, distinct plant- and animal-based foods converge on similar odorant compositions through shared reaction pathways. Building on these insights, we develop a generative AI model that produces category-targeted aroma formulations and validate its outputs by blinded human sensory evaluation. As a proof of principle, the model reconstructs meat-like aromas using exclusively plant-derived odorants, demonstrating a data-driven route to address sensory bottlenecks in sustainable food products.

systems biology↗

Elucidating the Diversity and Potential Function of Ribosomally Synthesized and Post-translationally Modified Peptides in the Human Microbiome

The human microbiome holds tremendous potential for generating specialized peptides, specifically ribosomally synthesized and post-translationally modified peptides (RiPPs), significantly affecting human health by mediating interactions with other microbes and the human host. However, the capacity of our microbiome to produce these peptides and their links with human health are poorly understood. This study systematically analyzes 306,481 human microbiota-associated genomes, uncovering a broad array of yet-to-be-discovered RiPPs. These RiPPs are distributed across various body sites but show a specific enrichment in the gut and oral microbiome. Big data omics analysis reveals that numerous RiPP families are inversely related to various diseases, suggesting their potential protective effects on health. For a proof of principle study, guided by biosynthetic prediction, nine autoinducing peptides (AIPs) were chemically synthesized for in vitro and ex vivo assay. Our findings revealed that five AIPs effectively inhibited the biofilm formation of disease-associated pathogens, with one demonstrating significant anti-inflammatory capabilities. Furthermore, when ex vivo testing gut bacteria from mice with inflammatory bowel disease, we observed that two AIPs could regulate the microbial community and reduce harmful species. These findings highlight the vast potential of human microbial RiPPs in regulating microbial communities and maintaining human health, emphasizing their potential for therapeutic development.

microbiology↗

Adrenal sympathetic nerve mediated the anti-inflammatory effect of electroacupuncture at ST25 acupoint on a rat model of sepsis

Acupuncture plays a vital anti-inflammatory action on sepsis through activating autonomic nerve anti-inflammatory pathways, such as sympathoadrenal medullary pathway, but the mechanism remains unclear. This study aims to explore the optimum parameter of electroacupuncture (EA) stimulation in regulating sympathoadrenal medullary pathway and evaluate EAs anti-inflammatory effect on sepsis. To explore the optimum parameter of EA at homosegmental acupoint on adrenal sympathetic activity, the left adrenal sympathetic nerve firing rate evoked by different intensities of single shock electrical stimulation (ES) at ST25 in healthy male Sprague-Dawley (SD) rats were evaluated by in vivo electrophysiological recording, and the levels of norepinephrine (NE) and its metabolites were also examined using mass spectrometry. To verify the role of EA at ST25 in sepsis, the rat was given intraperitoneal injection lipopolysaccharide to induce sepsis model, and survival rate, clinical score, and the level of interleukin (IL)-6, IL-1{beta}, and IL-10 were evaluated after EA application. We observed that 3 mA is the optimal intensity on activating adrenal sympathetic nerve, which significantly elevated the level of NE in the peripheral blood. For LPS-treated rats, EA at the ST25 apparently increased the survival rate and improved the clinical score compared to the control group. Furthermore, 3 mA EA at ST25 significantly decreased pro-inflammatory cytokines IL-6 and IL-1{beta} and upregulated anti-inflammatory cytokine IL-10 compared to the Lipopolysaccharide (LPS)-treated group. Overall, these data suggest that 3 mA is the optimal EA intensity at ST25 to activate the sympathoadrenal medullary pathway and exert an anti-inflammatory effect on sepsis. HighlightsO_LI3 mA single shock ES at ST25 drove adrenal sympathetic nerve reflexs. C_LIO_LI3 mA EA at ST25 upregulated NE concentration in peripheral blood. C_LIO_LIEA at ST25 improved the survival rate in a rat of LPS-induced sepsis model. C_LIO_LIEA at the ST25 upregulated anti-inflammatory IL10 and downregulated pro-inflammatory IL1{beta} and IL-6 in LPS-treated rats. C_LI

neuroscience↗