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Biology subjects

Young, J. N.

Publications and source records attributed to Young, J. N..

2 recordsLinked to original sources

Extracellular Carbonic Anhydrase Supports Constitutive HCO3- Uptake in Fragilariopsis cylindrus Regardless of Temperature Changes

Diatoms, including Fragilariopsis cylindrus (Fcyl), are the major primary producers in productive polar oceans. Little is known about carbon concentrating mechanisms (CCMs) in polar diatoms and their sensitivity to ocean warming and acidification. Here we characterized the CCM response to temperature in Fcyl using Membrane Inlet Mass Spectrometry. Fcyl increases RuBisCO expression at lower temperatures to compensate slower catalytic rates but maintains a reliance on HCO3- uptake across different temperatures (-2 {degrees}C to 9 {degrees}C) despite higher CO2 solubility at colder temperatures. However, when external carbonic anhydrase (eCA) is inhibited, inorganic carbon usage switches from HCO3- uptake to a dependency on CO2 diffusion. Incorporating these measurements with modeling, we propose that relying on eCA supported HCO3- uptake is an adaptive strategy to the highly dynamic polar ocean environment which experience large fluctuations in [CO2] but where HCO3- is constantly available.

plant biology↗

Molecular foundations of Precambrian uniformitarianism

The earliest geochemical indicators of microbes--and the enzymes that powered them--extend back almost 3.8 billion years on our planet. Paleobiologists often attempt to understand these indicators by assuming that the behaviors of modern microbes and enzymes are consistent (uniform) with those of their predecessors. A uniformitarian assumption (i.e., the idea that fundamental geobiological processes have occurred in much the same manner over Earth history) seems at odds with our understanding of the inherent variability of living systems. Here, we examine whether a uniformitarian assumption for an enzyme thought to generate carbon isotope indicators of biological activity, RuBisCO, can be corroborated by independently studying the history of changes recorded within RuBisCOs genetic sequences. Specifically, we resurrected a Precambrian-age, ancient RuBisCO by engineering its ancient DNA inside a modern cyanobacterium genome and measured the engineered organisms fitness and carbon-isotope-discrimination profile. The envelope of ancestral RuBisCO isotopic fractionation observed here indicates that uniformitarian assumptions may be warranted, but with important caveats. Our results suggest that further inquiries that link molecule-level evolutionary changes with planet-level geochemical conditions are needed to discern whether enzyme-affected isotope fractionation trends extend deeper into the early Precambrian. Experimental studies illuminating lifes early molecular innovations are crucial to explore the foundations of Precambrian uniformitarian assumptions.

evolutionary biology↗