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Biology subjects

Yago, M.

Publications and source records attributed to Yago, M..

3 recordsLinked to original sources

Dorsoventral comparison of intraspecific polymorphisms in the butterfly wing pattern using a convolutional neural network

Butterfly wing patterns exhibit notable differences between the dorsal and ventral surfaces, and morphological analyses of them have provided insights into the ecological and behavioural characteristics of wing colour patterns. Conventional methods for dorsoventral comparisons are constrained by the need for homologous patches or shared features between two surfaces, limiting their applicability across species. We used a convolutional neural network (CNN)-based analysis, which can compare images of the dorsal and ventral surfaces without focusing on homologous patches or features, to detect dorsoventral bias in intraspecific polymorphisms such as sexual dimorphism (SD) and female-limited mimetic polymorphism (FMP). Using specimen images of 29 butterfly species from the Yaeyama Islands, Japan, we first showed that the level of SD calculated by CNN-based analysis corresponded well with traditional assessments of SD, demonstrating the validity of the method. Dorsoventral biases were widely detected, particularly in SD, which tended to bias dorsally. This supports the conventional hypothesis that sexual selection acts more strongly on the dorsal surface. In contrast, the FMP analysis showed no significant bias. Our findings highlight CNN-based analysis as a versatile technique for dorsoventral comparisons, suggesting that broader species sampling could reveal general patterns of selection acting differentially on the two surfaces.

bioinformatics↗

Diverse genetic architectures on the Z chromosome underlie the two rules of speciation in Papilio butterfly hybrids

The fitness of animal hybrids follows two empirical rules: hybrids of the heterogametic sex aremore unfit (Haldanes Rule), and the sex chromosome is disproportionately involved in incompatibility (the large-X/Z effect). Whether these rules result from genetic mechanisms shared across taxa remains unknown, and existing explanations rarely consider female heterogametic taxa such as butterflies. Here, we investigate hybrid incompatibilities in Papilio and Heliconius butterflies, and show that defects coincide with unbalanced introgression between the Z chromosome and its genetic background. This polygenic mechanism predicts both rules because introgressed ancestry on the Z chromosome is more skewed in females, and is more variable than on all autosomes. Therefore, the explanation for both rules in butterflies shares little similarity with prevailing theories relying on dominance.

evolutionary biology↗

Genetic barriers to gene flow separate divergent substitution rates across a butterfly hybrid zone

Hybridization is a major evolutionary force that can erode genetic differentiation between species, whereas reproductive isolation maintains such differentiation. In studying a hybrid zone between the swallowtail butterflies Papilio syfanius and Papilio maackii, we made the unexpected discovery that genomic substitution rates are unequal between the parental species. This phenomenon creates a novel process in hybridization, where genomic regions most affected by gene flow evolve at similar rates, while genomic regions with greater reproductive isolation evolve at divergent rates. Thus, hybridization mixes evolutionary rates in a way similar to its effect on ancestry. Using coalescent theory, we show that the rate-mixing process provides distinct information about levels of gene flow across different parts of genomes, and that maintenance of divergent substitution rates can be predicted quantitatively from relative sequence divergence (FST) between the hybridizing species at equilibrium. A corollary is that divergent rates will be maintained in regions linked to barrier loci. Overall, we demonstrate that reproductive isolation maintains not only the final outcome of genomic differentiation, but also the rate at which differentiation accumulates. This new information also suggests that the separation of evolutionary rates co-localizes with the separation of gene pools between genomes of incipient species.

evolutionary biology↗