Biology subjects

Wolinska, J.

Publications and source records attributed to Wolinska, J..

4 recordsLinked to original sources

bioRxiv2024

Zooplankton bacterial communities are influenced by infection status, environmental conditions and diet quantity across natural epidemics

Zooplankton-associated microbiomes play an important role for host health and contribute to ecosystem processes such as nutrient cycling. Yet, few studies have assessed how environmental gradients and biotic interactions, including parasitism and diet, may shape the microbiome composition of wild zooplankton. Here, we analysed the microbiomes of water fleas from the Daphnia longispina species complex using 16S rRNA gene sequencing and a long-term field dataset spanning six sampling events over 13 years. Sampling coincided with outbreaks of the virulent eukaryotic gut parasite Caullerya mesnili. Additionally, we explored how microbiome structure varied in relation to water parameters, phytoplankton density (i.e. Daphnia diet), and zooplankton density and community structure. Daphnia microbiomes displayed strong temporal variation, and comparatively small differences based on host infection status. Microbiome beta diversity correlated with phytoplankton density but not with its community composition, including green algae, protists and cyanobacteria. Environmental conditions, including temperature, dissolved oxygen and cyanobacterial abundance - previously found to drive Caullerya epidemics - were also associated with distinct microbiome structures. Importantly, microbiome beta diversity co-varied with infection prevalence, suggesting a link between microbiome shifts, epidemic size, and environmental conditions driving large epidemics. Dominant bacterial taxa correlated with Daphnia density, whereas the phylogenetic composition of rare taxa was associated with total zooplankton density. These findings demonstrate the dynamic nature of Daphnia microbiomes and suggest potential mechanisms by which they may mediate disease dynamics, particularly through associations with diet quantity, temperature, and host population density.

ecology↗

bioRxiv2024

Warming-induced excess deaths of infected animals depend on pathogen kingdom and evolutionary history

Climate change is causing extreme heating events. Simultaneously, climate change and human activities are leading to more prolonged and intense infectious disease outbreaks. The extent to which warming and infection may together impact host species persistence is, however, unclear. Using a meta-analysis of >190 effect sizes representing 101 ectothermic animal host-pathogen systems, we provide broad evidence that experimentally increased temperatures drove higher pathogen virulence, specifically pathogen-induced host mortality. Such pattern was mainly driven by excess host death caused by bacterial infections combined with warming, particularly if the pathogenic bacteria were naturally established within the host species, though novel infections without known host-pathogen evolutionary history were more lethal at lower temperatures. Importantly, larger temperature increases were associated with more host deaths hinting at the escalating threat for animal species as the world continues to warm. We found that the virulence of fungal pathogens increased only when temperatures were shifted upwards towards their thermal optimum. The magnitude of these effects was not impacted by host life-stage, immune complexity, or variable experimental protocols. Overall, our findings reveal distinct patterns of pathogen virulence change under warmer temperatures, suggesting that the impact of global warming on infectious disease outcomes would depend on pathogen traits (taxonomic kingdom, thermal tolerance) and host-pathogen evolutionary history. Author SummaryHuman-induced climate warming is one of the biggest challenges in our times. Simultaneously, climate change is associated with more intense infectious disease outbreaks, suggesting that temperature rises also influence disease dynamics. Growing numbers of studies have investigated the effect of warming on disease severity (or pathogen virulence) in different animal host-pathogen systems. However, individual studies did not always agree with each other, and how increased temperature and pathogen infection together impact animal survival remains unclear. Here, we resolved this uncertainty by conducting a meta-analysis of >190 effect sizes representing 101 animal host-pathogen systems. We provided broad evidence that, higher temperatures caused more deaths of infected animals, particularly for animals with bacterial infections under warmer conditions. We found that larger temperature rises were associated with more animal deaths, suggesting the increased threat for host species as the world continues to warm. We also found that pathogenic fungi were more sensitive to heat than bacterial pathogens, and temperature changes the virulence of fungal pathogens in relation to their thermal optimum.

ecology↗

bioRxiv2023

Phylogenomics including new sequence data of phytoplankton-infecting chytrids reveals multiple independent lifestyle transitions across the phylum

Parasitism is the most common lifestyle on Earth and has emerged many times independently across the eukaryotic tree of life. It is frequently found among chytrids (Chytridiomycota), which are early-branching unicellular fungi that feed osmotrophically via rhizoids as saprotrophs or parasites. Chytrids are abundant in most aquatic and terrestrial environments and fulfil important ecosystem functions. As parasites, they can have significant impacts on host populations. They cause global amphibian declines and influence the Earths carbon cycle by terminating algal blooms. To date, the evolution of parasitism within the chytrid phylum remains unclear due to the low phylogenetic resolution of rRNA genes for the early diversification of fungi, and because few parasitic lineages have been cultured and genomic data for parasites is scarce. Here, we combine transcriptomics, culture-independent single-cell genomics and a phylogenomic approach to overcome these limitations. We newly sequenced 29 parasitic taxa and combined these with existing data to provide a robust backbone topology for the diversification of Chytridiomycota. Our analyses reveal multiple independent lifestyle transitions between parasitism and saprotrophy among chytrids, multiple host shifts by parasites, and suggest that the chytrid last common ancestor was a parasite of phytoplankton.

evolutionary biology↗

bioRxiv2022

Infection by a eukaryotic gut parasite in wild Daphnia sp. associates with a distinct bacterial community

Host-associated bacterial communities can play an important role in host fitness and resistance to diseases. Yet, few studies have investigated tripartite interaction between a host, parasite and host-associated bacterial communities in natural settings. Here, we use 16S amplicon sequencing to compare gut- and body-bacterial communities of wild water fleas belonging to the Daphnia longispina complex, between uninfected hosts and those infected with the common and virulent eukaryotic gut parasite Caullerya mesnili (Family: Ichthyosporea). We report community-level changes in host-associated bacteria with the presence of the parasite infection; namely decreased alpha diversity and increased beta diversity at the site of infection, i.e. host gut (but not host body). We also report decreased abundance of bacterial taxa proposed elsewhere to be beneficial for the host, and an appearance of taxa specifically associated with infected hosts. Our study highlights the host-microbiota-infection link in a natural system and raises questions about the role of host-associated microbiota in natural disease epidemics as well as the functional roles of bacteria specifically associated with infected hosts.

ecology↗