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Biology subjects

Wilber, M. Q.

Publications and source records attributed to Wilber, M. Q..

7 recordsLinked to original sources

Neglecting movement-disease feedback biases wildlife epidemic forecasts

In wildlife populations, movement drives host contact networks and disease spread. Growing evidence from veterinary science and experimental biology shows that infection commonly modifies host movement itself, a widespread feature of host biology. Yet conventional wildlife disease models treat movement as independent of infection, a mechanistic omission that could bias epidemic forecasts and management decisions. Here, we introduce a general framework in which recent infection temporarily alters a hosts home-ranging behavior and where pathogens are shed, integrating movement and disease ecology through spatially explicit, individual-based simulations. We show that infection-modified movement (IMM) responses, including anorexia, disorientation, and hypokinesia, can enhance or suppress epidemics, and most responses reverse direction depending on environmental conditions, grouping structure, and social behavior. We further show that models without IMM alternately underestimate and overestimate epidemic size as ecological context changes. Because our model parameters map onto quantities routinely estimated from tracking and surveillance data, our framework enables movement-disease feedback to be measured and incorporated into wildlife disease models.

ecology↗

Widespread occurrence of bovine-like and new viruses in wild deer across the United States

Over the past several decades, deer populations in North America have grown considerably, resulting in frequent contact with humans and livestock, and increased potential for pathogen spillover. Despite the importance of pathogen spillover among humans, wildlife, and livestock, the diversity of viruses present in deer remains largely unknown. Using a metagenomic high-throughput sequencing approach, we characterized viral communities in the upper respiratory tracts of live mule deer (Odocoileus hemionus) and white-tailed deer (Odocoileus virginianus) captured at fourteen study sites in nine states across the United States. We identified vertebrate-infecting viruses in both deer species at all but two of the study sites, located in Illinois and Utah. Viral richness did not vary among species or study sites. However, viral community composition was different across study sites but not among deer species. Amongst the detected viral sequences, several originate from or were closely related to viruses previously described in humans (e.g., severe acute respiratory syndrome coronavirus 2) and livestock (e.g., bovine-like coronavirus). We also documented viruses recently discovered in deer, such as CHeRI orbivirus 1. Finally, we identified several new putative viruses in the Picornaviridae, Rhabdoviridae and Tobaniviridae families, including a novel Aphthovirus related to bovine rhinitis A virus in both deer species, across seven states and nine study sites. Our findings expand the understanding of viral diversity in two deer species across the United States, providing important insights for managing pathogens at the wildlife, livestock, and human interface.

microbiology↗

The mean and variance of infection load reveal unseen host evolution

Heterogeneity among individuals, in number of parasites, body size, etc., can have critical interactions with population dynamics. We tease these out with a relatively simple model of such interactions in a case study of microparasite load with empirically supported assumptions to ask a key question. How does variance in microparasite load interact with population-level dynamics? We show how the mean and variance of infection load vary throughout an epidemic. Further, we show how mean and variance have mutual negative feedbacks on each other mediated by high disease-induced death rates at high loads. Helpfully, we find that mean and variance provide information into underlying processes as well. Population-level trends in the mean and variance reveal underlying trends in within-host processes, e.g., differentiating host evolution of defence that manifests as tolerance, constitutive resistance, inducible resistance, or acquired resistance. Such inference may be critical for managing endangered Mountain Yellow Legged Frog populations recovering from Batrachochytrium dendrobatidis epidemics. Lastly, we demonstrate the impact of pathogen load variance on host fitness, pathogen fitness, and host population depression by pathogens. Our results demonstrate the importance of trait heterogeneity and the insights available from relatively simple models, both for microparasite infection load and possibly other traits.

ecology↗

Do fungi look like macroparasites? Quantifying the patterns and mechanisms of aggregation for host-fungal parasite relationships

Most hosts contain few parasites, whereas few hosts contain many. This pattern, known as aggregation, is well-documented in macroparasites where parasite intensity distribution among hosts affects host-parasite dynamics. Infection intensity also drives fungal disease dynamics, but we lack a basic understanding of host-fungal aggregation patterns, how they compare to macroparasites, and if they reflect biological processes. To address these gaps, we characterized aggregation of the fungal pathogen Batrachochytrium dendrobatidis (Bd) in amphibian hosts. Utilizing the slope of Taylors Power Law, we found Bd intensity distributions were more aggregated than macroparasites, conforming closely to lognormal distributions. We observed that Bd aggregation patterns are strongly correlated with known biological processes operating in amphibian populations, such as epizoological phase--invasion, post-invasion, and enzootic--and intensity-dependent disease mortality. Using intensity-dependent mathematical models, we found evidence of evolution of host resistance based on aggregation shifts in systems persisting with Bd following disease-induced declines. Our results show that Bd aggregation is highly conserved across disparate systems and is distinct from aggregation patterns in macroparasites, and contains signatures of potential biological processes of amphibian-Bd systems. Our work lays a foundation to unite host-fungal dynamics under a common theoretical framework and inform future modeling approaches that may elucidate host-fungus interactions.

ecology↗

Correlated host movements can reshape spatio-temporal disease dynamics: modeling the contributions of space use to transmission risk using movement data

Despite decades of epidemiological theory making relatively simple assumptions about host movements, it is increasingly clear that non-random movements drastically affect disease transmission. To better predict transmission risk, theory needs to simultaneously account for how the environment affects host space use and how social dynamics affect correlation in space use. We develop new theory that decomposes the relative contributions of fine-scale space use and correlated movements to spatio-temporal transmission risk. Using analytical results, simulations, and empirical movement data, we show that even weak correlations can increase transmission risk by orders of magnitude compared to independent movement. Accounting for correlation is especially critical for pathogens with direct transmission or short environmental persistence. Our theory provides clear expectations for what has been observed empirically but largely ignored in disease models--movement correlation can reshape epidemiological landscapes, creating transmission hotspots whose magnitude and location are not necessarily predictable from spatial overlap alone.

ecology↗

Evolutionary rescue and reintroduction of resistant frogs allows recovery in the presence of a lethal fungal disease

Vast alteration of the biosphere by humans is causing a sixth mass extinction, driven in part by an increase in emerging infectious diseases. The emergence of the lethal fungal pathogen (Batrachochytrium dendrobatidis; "Bd") has devastated global amphibian biodiversity, with hundreds of species experiencing declines or extinctions. With no broadly applicable methods available to reverse these impacts in the wild, the future of many amphibians appears grim. The once-common mountain yellow-legged (MYL) frog is emblematic of amphibians threatened by Bd. Although most MYL frog populations are extirpated following disease outbreaks, some persist and eventually recover. Frogs in these recovering populations have increased resistance against Bd infection, consistent with evolution of resistant genotypes and/or acquired immunity. We conducted a 15-year landscape-scale reintroduction study and show that frogs collected from recovering populations and reintroduced to vacant habitats can reestablish populations despite the presence of Bd. In addition, results from viability modeling suggest that many reintroduced populations have a low probability of extinction over 50 years. To better understand the role of evolution in frog resistance, we compared the genomes of MYL frogs from Bd-naive and recovering populations. We found substantial differences between these categories, including changes in immune function loci that may confer increased resistance, consistent with evolutionary changes in response to Bd exposure. These results provide a rare example of how reintroduction of resistant individuals can allow the landscape-scale recovery of disease-impacted species. This example has broad implications for the many taxa worldwide that are threatened with extinction by novel pathogens. Significance StatementUnderstanding how species persist despite accelerating global change is critical for the conservation of biodiversity. Emerging infectious diseases can have particularly devastating impacts, and few options exist to reverse these effects. We used large-scale reintroductions of disease-resistant individuals in an effort to recover a once-common frog species driven to near-extinction by a disease that has decimated amphibian biodiversity. Introduction of resistant frogs allowed reestablishment of viable populations in the presence of disease. In addition, resistance may be at least partially the result of natural selection at specific immune function genes, which show evidence for selection in recovering populations. The evolution of resistance and reintroduction of resistant individuals could play an important role in biodiversity conservation in our rapidly changing world.

ecology↗

Disturbance macroecology: integrating disturbance ecology and macroecology in different-age post-fire stands of a closed-cone pine forest as a case study

Macroecological studies have generally restricted their scope to relatively steady-state systems, and as a result, how biodiversity and abundance metrics are expected to scale in disturbance-dependent ecosystems is unknown. We examine macroecological patterns in a fire-dependent forest of Bishop pine (Pinus muricata). We target two different-aged stands in a stand-replacing fire regime, one a characteristically mature stand with a diverse understory, and one more recently disturbed by a stand-replacing fire (17 years prior to measurement). We compare the stands using macroecological metrics of species richness, abundance and spatial distributions that are predicted by the Maximum Entropy Theory of Ecology (METE), an information-entropy based theory that has proven highly successful in predicting macroecological metrics across a wide variety of systems and taxa. Ecological patterns in the mature stand more closely match METE predictions than do data from the recently disturbed stand. This suggests METEs predictions are more robust in late-successional, slowly changing, or steady-state systems than those in rapid flux with respect to species composition, abundances, and organisms sizes. Our findings highlight the need for a macroecological theory that incorporates natural disturbance and other ecological perturbations into its predictive capabilities, because most natural systems are not in a steady state.

ecology↗