Search bioRxiv⌕ Search

Biology subjects

Wierckx, N.

Publications and source records attributed to Wierckx, N..

3 recordsLinked to original sources

Endosomal mRNA transport coordinates local mitochondrial bioenergetics during polar fungal growth

Mitochondrial function relies on the precise spatial coordination of protein synthesis and import. Most mitochondrial proteins are nuclear-encoded and must be supplied across varying intracellular distances. In highly polarized cells such as fungal hyphae and neurons, active long-distance mRNA transport is thought to sustain distal mitochondrial function, but its mechanistic coupling to protein import and organelle physiology is unclear. Here, we demonstrate that endosomal transport of mRNAs encoding mitochondrial proteins orchestrates local bioenergetics in infectious hyphae of Ustilago maydis. Using the subunit Atp3 of electron transport chain Complex V as a model, we uncover that the endosomal mRNA transporter Rrm4 is required for efficient mitochondrial protein import, particularly at growth poles. Loss of Rrm4 leads to defects in mitochondrial import, resulting in altered physiology. We propose that endosome-coupled mRNA transport constitutes a fundamental layer of subcellular mitochondrial homeostasis, with implications extending from fungal pathogenicity to neuronal disease. Significance StatementFungal pathogens depend on efficient polar growth to execute their infection programs. Consequently, their growing cell poles face a massive local demand of energy, which is supplied by mitochondria. Currently, it is unclear how involved proteins of the mitochondrial electron transport chain (ETC) reach these distant organelles. Here, we combine fungal genetics, metabolomics, transcriptomics and minimal invasive live-cell imaging to resolve this spatial challenge in the corn pathogen Ustilago maydis. We discover that long-distance endosomal hitchhiking of mRNAs encoding mitochondrial ETC components is essential to sustain active mitochondria at the expanding pole. Ultimately, this membrane-coupled mRNA trafficking precisely orchestrates subcellular mitochondrial function, disclosing a previously unrecognized Achilles heel for the development of novel fungicides.

microbiology↗

Bio-upcycling of polyethylene terephthalate

Over 359 million tons of plastics were produced worldwide in 2018, with significant growth expected in the near future, resulting in the global challenge of end-of-life management. The recent identification of enzymes that degrade plastics previously considered non-biodegradable opens up opportunities to steer the plastic recycling industry into the realm of biotechnology. Here, we present the sequential conversion of polyethylene terephthalate (PET) into two types of bioplastics: a medium chain-length polyhydroxyalkanoate (PHA) and a novel bio-based poly(amide urethane) (bio-PU). PET films were hydrolyzed by a thermostable polyester hydrolase yielding 100% terephthalate and ethylene glycol. A terephthalate-degrading Pseudomonas was evolved to also metabolize ethylene glycol and subsequently produced PHA. The strain was further modified to secrete hydroxyalkanoyloxy-alkanoates (HAAs), which were used as monomers for the chemo-catalytic synthesis of bio-PU. In short, we present a novel value-chain for PET upcycling, adding technological flexibility to the global challenge of end-of-life management of plastics. Graphical abstract O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=130 SRC="FIGDIR/small/993592v1_ufig1.gif" ALT="Figure 1"> View larger version (24K): org.highwire.dtl.DTLVardef@1433e0dorg.highwire.dtl.DTLVardef@19efc71org.highwire.dtl.DTLVardef@cf97f7org.highwire.dtl.DTLVardef@101f123_HPS_FORMAT_FIGEXP M_FIG C_FIG

bioengineering↗

Insights into an alternative pathway for glycerol metabolism in a glycerol kinase deficient Pseudomonas putida KT2440

Pseudomonas putida KT2440 is known to metabolise glycerol via glycerol-3-phosphate using glycerol kinase an enzyme previously described as critical for glycerol metabolism (1). However, when glycerol kinase was knocked out in P. putida KT2440 it retained the ability to use glycerol as the sole carbon source, albeit with a much-extended lag period and 2 fold lower final biomass compared to the wild type strain. A metabolomic study identified glycerate as a major and the most abundant intermediate in glycerol metabolism in this mutated strain with levels 21-fold higher than wild type. Erythrose-4-phosphate was detected in the mutant strain, but not in the wild type strain. Glyceraldehyde and glycraldehyde-3-phosphate were detected at similar levels in the mutant strain and the wild type. Transcriptomic studies identified 191 genes that were more than 2-fold upregulated in the mutant compared to the wild type and 175 that were down regulated. The genes involved in short chain length fatty acid metabolism were highly upregulated in the mutant strain. The genes encoding 3-hydroxybutyrate dehydrogenase were 5.8-fold upregulated and thus the gene was cloned, expressed and purified to reveal it can act on glyceraldehyde but not glycerol as a substrate.\n\nO_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=128 SRC=\"FIGDIR/small/567230_ufig1.gif\" ALT=\"Figure 1\">\nView larger version (21K):\norg.highwire.dtl.DTLVardef@1b5298eorg.highwire.dtl.DTLVardef@bb4841org.highwire.dtl.DTLVardef@184de3forg.highwire.dtl.DTLVardef@1b2e2a_HPS_FORMAT_FIGEXP M_FIG C_FIG

microbiology↗