Biology subjects

Wells, C. P.

Publications and source records attributed to Wells, C. P..

4 recordsLinked to original sources

bioRxiv2026

Endemic koloa maoli (Hawaiian Duck, Anas wyvilliana) shows preferential social associations, but not based on plumage or genetic relatedness

Island endemic birds are under greater threat than their mainland counterparts. Sedentary living and historically reduced predation may affect island bird sociality and inform their conservation and management. However, detailed studies on their sociality are uncommon. The federally- endangered koloa maoli (Anas wyvilliana, Hawaiian duck, or koloa) is primarily threatened by hybridization with feral mallards and avian botulism outbreaks. We used capture-mark-recapture and genetic data on koloa on the island of Kaua i, a stronghold of remaining koloa, to construct social networks and examine their associations (inferred from co-occurrence in traps) and spatial genetic structure. Information on associations might shed light on preferences for or against mallards and hybrids, and inform planned translocation efforts. Microgeographic spatial genetic structuring where relatedness among individuals scales with geographic distance is a potential liability for maintaining koloa genetic diversity, and would particularly be detrimental during highly localized outbreaks of botulism that could result in the removal of entire lineages. While we found persistent social associations among adult koloa, they were not apparently influenced by plumage traits or body mass, suggesting a lack of social preference for mallard-like individuals. Importantly, we found no spatial patterns of relatedness within the largest refuge. Therefore, botulism outbreaks remain a demographic threat but are unlikely to remove correlated genetic diversity. There were no sex differences in spatial genetic structure and both sexes moved within a refuge. The lack of spatial genetic structure and the presence of many unrelated conspecifics may enable koloa to limit inbreeding and retain genetic diversity without sex-biased dispersal. In the context of future translocations, our results suggest that translocating koloa captured in the same trap together will reduce disruption of preferred associations while also retaining genetic diversity among translocated individuals. LAY SUMMARYO_LIThe koloa maoli (Hawaiian duck, or koloa) is a federally-endangered, island endemic bird. Like other Hawaiian waterbirds, koloa are threatened by introduced predators and habitat loss, but also specifically by hybridization with feral mallards and localized avian botulism outbreaks. Currently, the island of Kaua i has the largest population of non-admixed koloa. We used capture-mark-recapture and genetic data of koloa at two wetland sites on Kaua i to examine their sociality and spatial genetic structure. C_LIO_LIKoloa formed preferential social associations, but they were not based on plumage traits, body mass or genetic relatedness. C_LIO_LIThere was no spatial genetic structure for males and females within a wetland site. Our results suggested that 1) koloa have no preference for mallard-like plumage that might increase hybrid pairing, 2) localized (within-refuge) botulism outbreaks are unlikely to remove close relatives and unique genetic lineages, and 3) translocation of groups could maintain social associations without limiting genetic diversity. C_LI

animal behavior and cognition↗

bioRxiv2025

No limit yet to phenological plasticity of reproductive timing in a high-elevation hibernator experiencing earlier springs

Plasticity in the timing of reproduction may enable species to adapt to changing climates and match reproductive demands to shifting peaks of energy availability. At high elevations, hibernating mammals are often facing drier winters and earlier snowmelt, shifting the onset of the vegetative growing season. We expect substantial plasticity in reproductive phenology at these sites because inter-annual variation in snowmelt date is typically high. However, whether species are reaching limits of phenological plasticity with ongoing directional change has rarely been assessed for vertebrate populations; identification of phenological limits is important to predict further adaptive capacity. Here, we use 30 years of litter weaning dates of golden-mantled ground squirrels (Callospermophilus lateralis) from the Rocky Mountains in Colorado, USA, to assess individual plasticity in reproductive phenology, population trends over time, and whether the population has reached a limit of plasticity. On average, litter weaning dates advanced by 2.3days/decade over the study period. We found that individual reproductive timing was quite plastic and exhibited near-zero heritability. At the population level, a linear relationship between average date of litter weaning and date of snowmelt suggests further potential for phenological adaptation to earlier springs. However, litters emerge later in relation to vegetative phenology in early springs, generating a potential mismatch between peak vegetative abundance and energetic demands of mothers and pups.

ecology↗

bioRxiv2025

Elephants inhabiting two forested sites in western Uganda exhibit contrasting patterns of species identity, density, and history of hybridization

Elephant populations across much of Africa face severe rates of decline due to poaching and habitat loss. The recent decision by the International Union for the Conservation of Nature (IUCN) to separately list African forest (Loxodonta cyclotis) and savanna (L. africana) elephants on the IUCN Red List both highlights the different threats of extinction faced by these two species and emphasizes the need for genetic data to classify taxonomically undefined populations across the continent. This includes western Uganda - a region that harbors the largest known modern hybrid zone between the two species. We combined a new high-throughput amplicon sequencing (HTAS) approach with fecal DNA-based Capture Mark Recapture (CMR) analysis to infer the population sizes and species compositions of elephants living in two forests. We demonstrate that Kibale National Park hosts a relatively large elephant population (573 individuals, 95% CI: 410 to 916; 0.72 elephants/km2) composed primarily of hybrids (81.5%) and savanna elephants (17.7%), while Bwindi Impenetrable National Park hosts a smaller population (96 individuals, 95% CI: 64 to 145; 0.29 elephants/km2) composed of forest elephants (86.8%) and hybrids (13.2%). We then sequenced maternally inherited (mtDNA) and paternally inherited (AMELY) genetic markers and found that the two parks populations exhibit different patterns of sex-linked genetic variation. The contrasting patterns of species identity and genetic variation between these parks demonstrate different histories of hybridization and highlight the importance of site-specific monitoring where elephants are taxonomically undefined.

ecology↗

bioRxiv2019

Abundance, density, and social structure of African forest elephants (Loxodonta cyclotis) in a human-modified landscape in southwestern Gabon

The noninvasive monitoring of population size and demography is critical to effective conservation, but forest living taxa can be difficult to directly observe due to elusiveness and/or inaccessible habitat. This has been true of African forest elephants (Loxodonta cyclotis), for which we have limited information regarding population size and social behavior despite their threatened conservation status. In this study, we estimated demographic parameters focusing specifically on population size and density using genetic capture-recapture of forest elephants in the southern Industrial Corridor of the Gamba Complex of Protected Areas, which is considered a global stronghold for forest elephants in southwestern Gabon. Additionally, we examined forest elephant sociality through analysis of social networks, predicting that we would find matrilineal structure as exhibited by savanna elephants and other forest elephants. Given 95% confidence intervals, we estimate the size of the population in the sampled area to be between 754 and 1,502 individuals and our best density estimate ranges from 0.47 to 0.80 elephants per km2. When extrapolated across the entire Industrial Corridor, this estimate suggests an elephant population size of 3,033 to 6,043 in this area based on abundance or 1,684 to 2,832 based on density, which is 40 - 83% smaller than previously suggested. Furthermore, our social network analysis revealed approximately half of network components included females with different mitochondrial haplotypes; this suggests a wider range of variation in forest elephant sociality than has previously been reported. This study emphasizes the threatened status of forest elephants and demonstrates the need to further refine baseline estimates of population size and knowledge on social behavior in this taxon, both of which will aid in determining how population dynamics in this keystone species may be changing through time in relation to increasing conservation threats.

genetics↗