Biology subjects

Wang, M.

Publications and source records attributed to Wang, M..

At least 163 records · Page 9Linked to original sources

bioRxiv2025

The 9p21.3 Coronary Artery Disease Risk Locus Modulates Vascular Cell-State Transitions via Enhancer-Driven Regulation of MTAP

The 9p21.3 locus is the strongest genetic association with coronary artery disease (CAD), yet its causal mechanisms remain unresolved. We map the regulatory architecture of 9p21.3 in disease-relevant vascular cells, identifying 12 enhancers within the CAD risk haplotype that respond dynamically to inflammatory and metabolic stress in fibroblasts and smooth muscle cells. These activated states are enriched for CAD heritability, implicating stress-responsive vascular wall cells in disease pathophysiology. Dense CRISPRi tiling integrated with fine-mapping and genomic constraint across >500,000 individuals nominates MTAP as the effector gene, with rs1537371 as a likely causal variant. Perturbation and multi-modal analyses show that MTAP loss induces pro-fibrotic and angiogenic programs and sensitizes vascular cells to TGF-{beta}-driven pathological transitions. Our findings reveal a vascular-specific enhancer network through which noncoding variation at 9p21.3 modulates CAD risk via MTAP--a previously unrecognized regulator of vascular remodeling located 269 kb from the risk haplotype. HighlightsO_LI9p21.3 CAD risk locus harbors 12 functional enhancers active in vascular wall cell types C_LIO_LICAD heritability is enriched in stressed vascular fibroblasts and smooth muscle cells C_LIO_LIHigh-resolution CRISPRi-MAC-seq maps 9p21.3 enhancer-gene and SNP-gene interactions C_LIO_LIMTAP identified as a causal effector gene regulated by 9p21.3 fine-mapped and constrained variants C_LIO_LIMTAP modulates TGF-{beta}-driven pathological vascular cell transitions C_LI

genomics↗

bioRxiv2025

Neural ensembles for music production recruit more language instruments as rhythmic complexity increases

Language and music, two core forms of human communication, both rely on rhythmic control. To date, the neural ensembles supporting their real-time production are not fully characterized. Using rapid phase-encoded fMRI, we mapped the spatiotemporal brain dynamics of overt language and music production under varying rhythm control demands. We observed overlapping hemodynamic traveling waves across domains, with auditory-motor regions activated earlier, followed by visual, posterior parietal, and Sylvian parietal-temporal (Spt) regions, supporting sensorimotor transformation and online monitoring of production. Increasing rhythmic complexity elicited slower and stronger activations in both domains: compared with baseline, regular rhythm control elicited delayed and amplified responses, while irregular rhythm control produced the slowest and strongest responses. During music production, rhythm-related activity expanded into frontal and temporal language regions, suggesting that higher rhythmic demands engage language resources. These findings reveal dynamic neural ensembles that can flexibly reconfigure shared resources to support temporal precision in sequence production.

neuroscience↗

bioRxiv2025

Multimodal AI Decodes Extreme Environment Functional Dark Matter Beyond Homology

Functional annotation of proteins from extreme environments represents a major bottleneck for bioresource discovery, as a vast reservoir of functional dark matter defies existing homology-based methods. We demonstrate that environmental pressures impart conserved physicochemical energy signatures that co-determine protein function with sequence and structure. Here we developed ACCESS, a multimodal graph neural network employing hierarchical contrastive learning with a tailored label-sample co-embedding to fuse energy, sequence, and structural information and overcome homology scarcity. ACCESS surpasses state-of-the-art methods including BLASTp and CLEAN in annotating low-identity enzymes. Applied to extreme environmental metagenomics, we constructed a function map of extremophile enzymes to expand the biocatalyst library, pinpointed functionally critical residues to guide rational design, and enabled large-scale, function-based macro-evolutionary analyses. This paradigm transcends the limitations of homology, illuminating protein dark matter and accelerating the exploration of the biospheres functional diversity for applications in biotechnology and therapeutic development.

bioinformatics↗

bioRxiv2025

Behavioral Thermoceptive Responses and Morphologic Correlates in Mouse Models of CMT1A, HNPP and Aging

BackgroundThermoceptive dysfunction is a frequent but understudied feature of peripheral neuropathies and aging. Patients often report abnormal heat perception, yet the underlying sensory mechanisms remain unclear. This study evaluated thermoceptive behavior and corresponding structural changes in mouse models of inherited dysmyelinating neuropathy and natural aging to identify shared and divergent mechanisms. MethodsThermal preference was assessed using a user-independent gradient apparatus spanning physiological to noxious temperatures, with automated quantification of time in zone, distance traveled, and velocity. Nocifensive responses were evaluated by hot plate latency. Intraepidermal nerve fiber density (IENFD) was measured in paw pads, and TRPV1-positive dorsal root ganglion (DRG) neurons were analyzed by immunofluorescence and confocal imaging. ResultsThermal gradient testing revealed preserved temperature preference in CMT1A and HNPP mice but significantly altered behavior in aged animals, which spent less time in warmer zones. Hot plate testing showed prolonged times to nocifensive behavior in aged and CMT1A mice, whereas HNPP mice exhibited variable responses. IENFD was markedly reduced in aged mice but preserved in CMT1A and HNPP. DRG analysis revealed smaller soma diameters and reduced proportions of TRPV1-positive A{delta} neurons in aged mice, while CMT1A animals maintained normal morphology. InterpretationAging produces thermoceptive deficits through axonal degeneration and selective A{delta}-fiber vulnerability, whereas CMT1A mice display conduction-related impairment due to dysmyelination. Both models reproduce key human sensory phenotypes and provide translational platforms for studying small-fiber dysfunction and therapeutic interventions in peripheral neuropathies. Key PointsO_LIThermoceptive dysfunction is a common but understudied feature of peripheral neuropathy and aging. C_LIO_LIIn aged mice, altered thermal preference, reduced intraepidermal nerve fiber density, and smaller TRPV1-positive A{delta} neurons indicate a degenerative mechanism of sensory loss. C_LIO_LIIn CMT1A mice, delayed noxious heat responses occur despite preserved epidermal and DRG morphology, consistent with dysmyelination rather than axonal degeneration. C_LIO_LIHNPP mice showed inconsistent nocifensive responses without structural fiber loss, suggesting strain- or injury-dependent effects. C_LIO_LIThermal gradient and hot plate assays demonstrate strong reproducibility and provide relevant outcome measures for preclinical modeling of thermoceptive dysfunction. C_LI

neuroscience↗

bioRxiv2025

Key molecular and cellular events of table olive fruit abscission zone formation during natural maturation and after ethephon treatment

Abscission zones are specialized cell layers that enable organ detachment, yet their morphology and regulation vary among species. Olive (Olea europaea), a non-climacteric fruit, requires high concentrations of ethylene-releasing compounds to reduce fruit removal force (FRF) for mechanical harvest. To elucidate mechanisms of fruit abscission zone (FAZ) development in olive, we integrated physiological, transcriptomic, and cellular analyses during natural maturation and after ethephon treatment. Olive fruits emitted low ethylene at color transition, coinciding with declining FRF, and application of 1500 ppm ethephon reduced FRF after one week. Transcriptome analyses of FAZ tissues, using a mesocarp-subtraction strategy to isolate FAZ-specific responses, identified 733 FAZ-specific genes shared between natural maturation and ethephon treatments, including genes of {beta}-1,3-glucanases, pectate lyases, and the phenylpropanoid pathway. Microscopy revealed lignification and alkalization of FAZ, accompanied by reduced low-methylesterified homogalacturonan and non-fucosylated xyloglucan. Increased glucanase activity and reduction in plasmodesmata callose likely facilitate cellular communication during abscission. Further, this study provides the first evidence of FAZ alkalization and implicates transporter upregulation in pH regulation preceding abscission. Our findings advance understanding of abscission biology in non-climacteric fruits and delineate conserved features of FAZ development. Summary StatementIntegrated physiological, transcriptomic, and cellular analyses reveal that fruit abscission zone development in olive involves lignification, alkalization, and coordinated cell wall remodeling, identifying {beta}-1,3-glucanases, pH-regulating transporters, and pectate lyases that facilitate cell separation in a non-climacteric fruit.

plant biology↗

bioRxiv2025

Olfactory biopsy analysis of Alzheimer's pathobiology across disease stages

Alzheimers Disease (AD) is a neurodegenerative condition affecting millions worldwide. Defining early pathobiological events remains challenging, in part due to inaccessibility of neural tissue. Because olfactory neurons are accessible, and olfactory loss is prevalent in AD, we evaluated olfactory brush biopsies from controls, individuals with cerebrospinal fluid (CSF) biomarker-confirmed AD, and cognitively typical individuals whose positive biomarkers signal a pre-clinical AD stage. We define via single cell RNA-sequencing (n=22 subjects) conserved neuroinflammatory T cell, myeloid, and olfactory neuron changes detectable even in pre-clinical AD subjects. Activated memory T cell states were a hallmark of pre-clinical AD, paralleling CSF T cell phenotypes seen in advanced disease, accompanied by both microglia-like inflammatory programs and olfactory neuron inflammatory injury. Together, our findings establish a novel platform permitting analysis of neural tissue in AD at its earliest stages.

neuroscience↗

bioRxiv2025

Decoding the Valence of Developmental Social Behavior: Dopamine Governs Social Motivation Deficits in Autism

The social motivation theory posits that core social deficits in autism spectrum disorder (ASD) arise from impaired social valence assignment during the social critical period, yet the specific dopaminergic mechanisms governing this process remain unclear. We combined high-resolution behavioral sequencing (Social-seq) with fiber photometry to resolve nucleus accumbens (NAc) dopamine during naturalistic juvenile interactions. Sex-divergent social strategies emerged: males exhibited peer play-dominant interactions with action-contingent dopamine release, while females favored environmental exploration with attenuated social dopamine. Shank3-deficient juveniles exhibited a triad of dopaminergic dysregulation -- blunted signaling during social investigation, pathological inversion during active play, and hyper-responsive to non-social stimuli -- recapitulating ASD-like phenotypes. Closed-loop activation of dopamine during play rescued social deficits, establishing a causal link between phasic dopaminergic signaling and social motivation. These findings identify NAc dopamine as a dynamic encoder of social valence and suggest that temporally precise modulation of dopaminergic circuits may offer therapeutic leverage for ASD-related social impairments.

neuroscience↗

bioRxiv2025

A multi-tissue atlas of genetic regulatory effects in sheep

Characterizing the impact of genomic variants on genome function and ultimately complex traits in livestock is essential for the development of sustainable precision agriculture and comparative genomics. Here, as part of the Farm animal Genotype-Tissue Expression (FarmGTEx) project, we present the pilot phase of the SheepGTEx resource through analyzing 6,761 RNA-sequencing samples of 51 primary tissues in a multi-breed population of sheep. We identify millions of regulatory variants associated with seven types of molecular phenotypes, and fine-map 322,468 primary and 114,017 non-primary effects, revealing a high degree of regulatory allelic heterogeneity. We systematically characterize the pleiotropic effects of these variants on molecular phenotypes, assess their context-specific regulatory patterns across tissues, breeds, sexes, and developmental stages, as well as explore their evolutionary constraints across mammals. Finally, we demonstrate the substantial potential of the SheepGTEx resource (https://sheepgtex.farmgtex.org), by providing examples of regulatory mechanisms underpinning 34 complex traits, population divergence between European and Asian breeds, and adaptive evolution in sheep over the past ten millennia.

genomics↗

bioRxiv2025

Argon inhibits autophagy and improves cerebral ischemia-reperfusion injury via PI3K/Akt/mTOR pathway

It has been reported that argon has neuroprotective effects during cerebral ischemia-reperfusion injury (CIRI). However, the specific mechanism is not fully understood. The aim of this study is to investigate if argon could regulate autophagy to exert a neuroprotective function. A temporary middle cerebral artery ischemia mouse model (tMCAO, ischemia 3h, reperfusion 1h) and the HT22 cell line Oxygen glucose deprivation reperfusion (OGDR) model were used for argon treatment. Transcriptome sequencing and bioinformatics analysis were performed on HT22 OGDR models. Western blot, CCK-8, LDH, transmission electron microscopy, agonists and inhibitors of autophagy and PI3K/Akt/mTOR were used to investigate the specific mechanism. Argon could reduce infarct volume, improve weight recovery, and neurological scores. Enrichment analysis of the KEGG signaling pathway was highly correlated with the PI3K/Akt pathway. Western blot, CCK-8, LDH, and transmission electron microscopy showed that argon could activate the PI3K/Akt/mTOR pathway and inhibit autophagy, promoting a neuroprotective function. After the combined use of autophagy inducer 3, Akt inhibitor MK2206, and mTOR inhibitor rapamycin, respectively, the neuroprotective function of argon was significantly reversed. Our study suggests that argon activating the PI3K/Akt/mTOR pathway and inhibiting autophagy is an important mechanism for its neuroprotective function.

neuroscience↗

bioRxiv2025

AnnotateAnyCell: Open-Source AI Framework for Efficient Annotation in Digital Pathology

AO_SCPLOWBSTRACTC_SCPLOWManual annotation of histopathological whole slide images remains a critical bottleneck for computational pathology and clinical AI deployment, requiring prohibitive expert time at scale. Here we present an open-source semi-supervised framework combining active contrastive learning with iterative human-in-the-loop feedback for efficient cellular annotation and classification. The pipeline integrates Cellpose segmentation, UMAP-based latent space visualization, and contrastive learning with pseudolabel propagation, evaluated on five whole slide images of canine invasive urothelial carcinoma across low, intermediate, and high histological grades at 40x magnification. Latent space clustering-guided annotation required 47 minutes compared to 63 minutes for sequential annotation, a 25% reduction (95% CI 18-32%). Classification accuracy reached 96.3% {+/-} 1.2% for mitotic figures and 98.3% {+/-} 1.4% for nucleoli using 1,075 labeled samples, with nucleoli classification achieving 95.5% {+/-} 1.5% accuracy from only 215 samples. Inter-annotator agreement was high for chromatin ({kappa} = 1.00) and nucleoli ({kappa} = 0.95) but moderate for mitotic figures ({kappa} = 0.58) and nuclear shape ({kappa} = 0.36), reflecting intrinsic morphological ambiguity in these categories. This framework substantially reduces annotation burden while achieving expert-level accuracy for well-defined morphological features, providing a scalable path toward AI-assisted diagnostics in resource-constrained pathology settings.

pathology↗

bioRxiv2025

Refining the Bio-manufacturing of Microalgae-derived Extracellular Vesicles as a Potential Nanotherapeutic for Osteoarthritis

Osteoarthritis (OA) is a degenerative joint disease marked by oxidative stress, chronic inflammation, and cartilage degradation. Current treatments are limited and fail to address the underlying disease mechanisms. Extracellular vesicles (EVs) have emerged as promising nanotherapeutics; however, mammalian-derived EVs face cost and scalability challenges. Microalgae represent a sustainable alternative, yet their potential as EV biofactories for regenerative medicine remains unknown. This study aims to refine the bio-manufacturing of microalgae EVs as a next-generation nanotherapeutic for OA. Microalgae species (Chlorella sorokiniana, Synechococcus sp., Leptolyngbya sp., Chlamydomonas reinhardtii CC1690) were screened under varying photoperiods (0h, 16h, 24h light/day) to assess the influence on viability, growth and EV production. EVs were characterized by transmission electron microscopy, nanoparticle tracking analysis, protein quantification and immunoblotting. Their antioxidant capacity, cellular recruitment, and therapeutic efficacy were evaluated in a cytokine-induced OA-like in vitro model. Our findings demonstrated that microalgae growth and EV yield were highly light-dependent, with all species maintaining high viability (>80%) across different photoperiods. Notably, Leptolyngbya sp. (Leptolyngbya) exhibited the fastest growth and highest EV yield under extended illumination, producing EVs with strong antioxidant activity. Leptolyngbya-derived EVs (Lepto-EVs) enhanced the proliferation and migration of human bone marrow-derived mesenchymal stromal cells and provided protection against matrix degradation within a cytokine-induced OA-like model. These findings position microalgae, particularly Leptolyngbya, as a highly scalable and sustainable producer of therapeutic EVs. Lepto-EVs offer a potent, cell-free nanotherapeutic exhibiting anti-catabolic properties alleviating cytokine-induced matrix degradation in an OA-like milieu, establishing microalgae EVs as a promising, cost-effective frontier in regenerative nanomedicine. Graphical abstract O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=98 SRC="FIGDIR/small/685512v1_ufig1.gif" ALT="Figure 1"> View larger version (29K): org.highwire.dtl.DTLVardef@ac6400org.highwire.dtl.DTLVardef@1d948a7org.highwire.dtl.DTLVardef@30fc13org.highwire.dtl.DTLVardef@1f576c8_HPS_FORMAT_FIGEXP M_FIG C_FIG

bioengineering↗

bioRxiv2025

Excitatory neurons as the default fate in bifurcation of excitatory and inhibitory neuron lineages

In the brain, a precise excitation-inhibition balance underpins every neural operation. Strikingly, across the vertebrate CNS, excitatory and inhibitory neurons often emerge from common progenitors (termed EX-IN lineage), yet how such dichotomous fates diverge has remained enigmatic. Here, exploiting spinal v2a (excitatory)-v2b (inhibitory) and retinal bipolar (excitatory) - amacrine (inhibitory) lineages as EX-IN lineage paradigm, we report a single, conserved genetic program: excitatory neural fate is the default state when sibling-cell communication is silenced; progenitor- and excitatory neuron-expressed homeobox genes actively repress the inhibitory program, while Notch signaling releases this repression to unleash inhibitory identity. Thus, we define a unifying principle governing EX-IN lineage divergence that generate the fundamental dichotomy of neural circuits.

developmental biology↗

bioRxiv2025

Structure and function of the nairovirus cap-snatching endonuclease

Nairoviruses include several human pathogens such as Crimean-Congo hemorrhagic fever virus (CCHFV) and Kasokero virus (KASV). The cap-snatching endonuclease (EN) domain of the viral polymerase is essential for transcription and represents a promising antiviral target. However, the structural and functional mechanisms of nairovirus ENs remain poorly understood. Here, we describe biochemical and structural studies of the ENs from CCHFV and KASV. Biochemical assays demonstrate that the RNA endonuclease activity of both ENs is activated by manganese ions and exhibits a preference for uridine-rich RNA substrates. This activity is inhibited by three metal-chelating inhibitors (DPBA, L-742,001, and BXA), with BXA displaying the highest binding affinity and inhibitory potency. We further determine nine crystal structures of CCHFV and KASV ENs in apo, metal ion-bound, and inhibitor-bound states. Comparative structural analysis uncovers a two-metal-ion binding mode unique to nairovirus ENs, in which conserved residues coordinate two manganese ions via bridging water molecules. In the inhibitor-bound structures of KASV EN, BXA forms additional stabilizing interactions with the enzyme, explaining its superior inhibitory effect. Functional assays further confirm that the two-metal-ion mechanism is critical for viral transcription. These findings provide a structural foundation for the rational design of antivirals against CCHFV and related pathogens.

microbiology↗

bioRxiv2025

Inhibition mechanism of pancreatic KATP channels by centipede toxins

The pancreatic ATP-sensitive potassium (KATP) channel acts as a crucial metabolic sensor by regulating insulin secretion to maintain whole-body energy homeostasis. Gain-of-functional mutations in this channel lead to neonatal diabetes mellitus, a rare disorder in which certain mutants demonstrate resistance to standard sulfonylurea therapy. Recent studies have identified a centipede toxin, SpTx1, as a potent inhibitor of both human pancreatic KATP channels and their gain-of-functional mutants. This toxin stimulates insulin secretion, offering a promising therapeutic strategy for neonatal diabetes. Nevertheless, the molecular mechanism by which SpTx1 inhibits the KATP channel has remained elusive. Here, we report the crystal structure of SpTx1 and the cryo-electron microscopy (cryo-EM) structure of the KATP channel in complex with SpTx1. Our results demonstrate that SpTx1 binds to the extracellular surface of the Kir6.2 pore-forming subunit of the KATP channel. Multiple interactions at the SpTx1-Kir6.2 interface underpin the high affinity and specificity of SpTx1 for human Kir6.2. We show that SpTx1 inhibits potassium currents by physically blocking the ion conduction pore. Furthermore, a structure-guided search identified another centipede toxin, Sm3a, as a novel KATP channel blocker. Together, these findings provide key insights into the inhibitory mechanism of centipede toxins against the human Kir6.2-containing KATP channel and establish a foundation for developing these toxins into potential therapeutics targeting KATP channel-related diseases.

biophysics↗

bioRxiv2025

FcγRI is the key determinant of antibody-mediated Zika virus infection of human placental macrophages

Zika virus (ZIKV) can be vertically transmitted from a pregnant mother to the developing fetus, resulting in microcephaly and/or other congenital malformations. Dengue virus (DENV) cross-reactive antibodies can facilitate ZIKV placental transcytosis and enhance ZIKV infection of placenta macrophage-Hofbauer cells through binding to Fc-{gamma} receptors (Fc{gamma}Rs). To understand the role of individual Fc{gamma}R in antibody-mediated ZIKV placental infection, we generated a comprehensive panel of Fc-variants spanning a wide range of binding affinities to different Fc{gamma}Rs. We found that mutations with increased affinity to Fc{gamma}RI strongly correlated with an increased frequency of infected pro-monocytic U937 and Hofbauer cells. Next, we genetically deleted individual Fc{gamma}R in U937 cells, and found that the knockout of FCGR1A gene completely abolished ZIKV infection. In contrast, the deletion of FCGR2B gene showed no effect on ZIKV infection, and the deletion of FCGR2A gene had only a moderate impact on ZIKV infection. We further observed that Fc{gamma}RI was involved in both increased ZIKV internalization and replication. Collectively, our results establish Fc{gamma}RI as the key Fc receptor responsible for antibody-mediated ZIKV infection in both U937 and primary placental macrophages. These mechanistic findings not only provide insight into the importance of Fc{gamma}RI in ZIKV vertical transmission but also highlight Fc{gamma}RI as a potential therapeutic target, with significant implications for the development of strategies to prevent ZIKV transmission from mother to fetus.

immunology↗

bioRxiv2025

Distinct and compensatory roles of Stag1 and Stag2 in post-mitotic genome refolding

The three-dimensional architecture of the eukaryotic genome is largely shaped by the cohesin complex, which contains either Stag1 or Stag2 subunits. Although both subunits contribute to chromatin organization, their specific functions in de novo loop formation during post-mitotic genome refolding remain elusive. Here, we leverage the mitosis-to-G1 transition to dissect their individual roles. We found that Stag1 depletion has a negligible impact on post-mitotic genome restructuring or transcription reactivation. In contrast, Stag2 orchestrates chromatin remodeling in a manner that is both cell cycle stage-specific and chromatin context-dependent. During early-G1, Stag2 preferentially associates with euchromatin, where it drives the rapid formation of small chromatin loops. This facilitates prompt promoter-enhancer (P-E) contact formation and enables efficient transcription activation. As the nuclear concentration of Stag2 increases by late-G1, it progressively suppresses large loops, likely due to its shorter chromatin residence time and its potential to competitively displace the more extrusion-capable Stag1-associated cohesin. Mechanistically, Stag2-mediated loop extrusion is constrained by CTCF-bound barriers, rather than by genomic travel distance. Although Stag2 associates rapidly with euchromatin in early-G1, its recruitment to heterochromatin is delayed until late-G1. Simultaneous depletion of both Stag proteins results in a synergistic loss of virtually all structural loops and a more severe disruption of transcription than that caused by individual deletions. Together, these results establish Stag2 as the principal regulator of post-mitotic genome reorganization among Stag paralogs, mediating spatiotemporal control of chromatin architecture, while Stag1 provides compensatory support to ensure functional robustness.

molecular biology↗

bioRxiv2025

FLASH Radiotherapy Mitigates Radiation-Induced Lymphopenia and Prevents Immunosuppression via Chk1-STAT3 Axis Modulation in a Preclinical Thoracic Irradiation Model

Background and AimsRadiation-induced lymphopenia (RIL) is a frequent side effect of conventional radiation therapy (CONV RT), due to the high radiosensitivity of circulating lymphocytes. Ultra-high dose rate "FLASH" RT may preferentially spare normal tissue while maintaining tumor control. This study evaluates the impact of single-fraction and multi-fraction thoracic FLASH RT on lymphocyte preservation, apoptosis, and immunosuppressive signaling in mice. MethodsWe compared the immunological impact of thoracic FLASH RT and CONV RT in C57BL/6 mice using single-fraction (17 Gy) and multi-fraction (2 Gy x 5) regimens using the Mobetron (IntraOp). Longitudinal blood sampling was performed at multiple time-points post-irradiation through facial vein bleed with flow cytometry analysis for CD4+, CD8+, CD19+, and NK cells to assess lymphocyte counts, apoptotic lymphocytes through Annexin V staining, and immune suppression by examining regulatory T cells (Tregs) and PD-1/PD-L1 expression. Mechanistic studies included immunofluorescence and Western blot analyses of splenic tissues to evaluate Chk1 and STAT3 signaling pathways. ResultsIn single-fraction RT, FLASH significantly reduced lung and heart fibrosis (p < 0.0001) at 28 weeks post-RT. The FLASH effect was also seen acutely on circulating immune cells, with significantly reduced lymphocyte apoptosis and accelerated recovery of CD4, CD8, CD3, NK, and B cell populations compared to CONV RT in both single-fraction and multi-fraction regimens. Conversely, CONV RT induced long-lasting increases in Tregs and sustained PD-1 and PD-L1 expression on T- and B-cells at 2- and 5-months post-irradiation in both fractionation regimens. Within the spleen, we also found CONV RT induced sustained activation of the Chk1-STAT3 pathway in CD45+ immune cells, which correlates with increased PD-1/PD-L1 expression. ConclusionFLASH RT mitigates RIL, reduces lymphocyte apoptosis, and prevents long-term immunosuppression by reduced activation of the Chk1-STAT3 pathway. These findings suggest FLASH RT may confer immunological advantages over CONV RT to enhance therapeutic efficacy.

cancer biology↗

bioRxiv2025

Inhibition of CGRP receptor ameliorates AD pathology by reprogramming lipid metabolism through HDAC11/LXRβ/ABCA1 signaling

The Calcitonin gene-related peptide (CGRP) receptor has gained attention in Alzheimers Disease (AD) research due to its involvement in regulating neuroinflammation. However, its role and mechanism in AD pathology remain unclear. Here, we demonstrate that CALCRL, a core component of the CGRP receptor, is upregulated in the hippocampus of AD dementia patients and 5xFAD mice. Knockout of the CGRP receptor ligand Calca or pharmacological blockade using Rimegepant (Rim), reduces soluble A{beta}1-42 oligomer-induced neuronal death and glial inflammation. Rim treatment also rescues neurobehavioral impairments, neurodegeneration, and lipid metabolism dysfunction in 5xFAD mice. Mechanistically, these effects are mediated through HDAC11 inhibition, which enhances LXR{beta} acetylation and ABCA1 expression, promoting the reprogramming of neuronal lipid metabolism. Importantly, this CALCRL/HDAC11/LXR{beta}/ABCA1 axis is conserved across both humans and mice. Our findings uncover a novel mechanism underlying AD pathogenesis and highlight the therapeutic potential of targeting CGRP signaling in AD. HIGHLIGHTSInhibition of CGRP receptor ameliorates disease pathology in models of AD HDAC11 mediates CGRP receptor function in AD HDAC11 is a pivotal regulator in lipid metabolism by LXR{beta}/ABCA1 signaling The HDAC11/LXR{beta}/ABCA1 axis is conserved in AD humans and mice

neuroscience↗