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Virolle, C.

Publications and source records attributed to Virolle, C..

3 recordsLinked to original sources

Bacteriostatic antibiotics drive bacterial death by reshaping competitive interactions

Protein synthesis inhibitors, including macrolides and tetracyclines, are classically defined as bacteriostatic because they arrest bacterial growth without directly causing death. Yet their effects vary widely across bacterial species and communities, suggesting that additional mechanisms shape their ecological impact. Here we show that the human gut commensal Escherichia coli ED1a kills the laboratory strain BW25113 specifically when protein synthesis is inhibited. We find that this killing is mediated by colicin K, a bacteriocin encoded on a plasmid carried by ED1a alongside its cognate immunity factor. Because ED1a itself is far more sensitive to protein synthesis inhibitors than BW25113 (surviving antibiotic exposure roughly 1,000-fold less efficiently), we expected antibiotic treatment to favour BW25113 in co-culture. Instead, we found that antibiotic exposure suppresses BW25113 below the population density required to coexist with colicin-producing ED1a, triggering colicin-dependent elimination of the sensitive strain, ultimately leading to the collapse of both populations. Screening a library of 1,085 E. coli isolates revealed that this antibiotic-induced, toxin-mediated killing is not unique to the ED1a-BW25113 pair but is a widely conserved interaction across natural strain combinations. Thus, a nominally bacteriostatic antibiotic can indirectly drive bacterial death by reshaping competitive dynamics between strains rather than by any direct bactericidal action. These findings reveal a previously unrecognized route by which protein synthesis inhibitors influence bacterial competition, and offer a framework for understanding how clinically important bacteriostatic antibiotics can eliminate bacterial populations and restructure microbial communities.

microbiology↗

Plasmid-encoded host reprogramming promotes plasmid dissemination

Conjugative plasmids are major drivers of antibiotic resistance dissemination, yet how newly transferred plasmids establish in recipient cells remains poorly understood. Here we investigate YfjB, a previously uncharacterized conserved leading-region protein, which is zygotically induced immediately after plasmid entry and acts specifically during the earliest post-transfer stages. Multi-omics analyses reveal that YfjB reprograms host transcription, triggering extensive metabolic rewiring that compensates the transient fitness cost of plasmid acquisition. Structural analyses show that YfjB is a ParB-like protein containing a CTP-binding domain and a helix-turn-helix DNA-binding motif, linked to a previously uncharacterized dimerization module that forms a V-shaped clamp-like architecture compatible with DNA loading. Consistently, live-cell imaging reveals nucleoid-associated foci in transconjugants, and ChIP-seq identifies multiple chromosomal binding sites. We therefore rename the protein HerB (Host Expression Reprogrammer, ParB-like). More broadly, our findings reveal how mobile genetic elements facilitate their dissemination by transiently subverting host physiology.

microbiology↗

Real-time visualisation of conjugation reveals the molecular strategy evolved by the conjugative F plasmid to ensure the sequential production of plasmid factors during establishment in the new host cell

DNA conjugation is a contact-dependent horizontal gene transfer mechanism responsible for disseminating drug resistance among bacterial species. Conjugation remains poorly characterised at the cellular scale, particularly regarding the reactions occurring after the plasmid enters the new host cell. Here, we use live-cell microscopy to visualise the intracellular dynamics of conjugation in real time. We reveal that the transfer of the plasmid in single-stranded DNA (ssDNA) form followed by its conversion into double-stranded DNA (dsDNA) are fast and efficient processes that occur with specific timing and subcellular localisation. Notably, the ss-to-dsDNA conversion is the critical step that governs the timing of plasmid-encoded protein production. The leading region that first enters the recipient cell carries single-stranded promoters that allow the early and transient synthesis of leading proteins immediately upon entry of the ssDNA plasmid. The subsequent ss-to-dsDNA conversion turns off leading gene expression and licences the expression of the other plasmid genes under the control of conventional double-stranded promoters. This elegant molecular strategy evolved by the conjugative plasmid allows for the timely production of factors sequentially involved in establishing, maintaining and disseminating the plasmid.

microbiology↗