Biology subjects

Turpin, C.

Publications and source records attributed to Turpin, C..

5 recordsLinked to original sources

bioRxiv2022

Zinc Fingers and Homeoboxes 2 is Required for Diethylnitrosamine-induced Liver Tumor Formation in C57BL/6 Mice

Liver cancer, comprised mainly of hepatocellular carcinoma (HCC), is the third leading cause of cancer deaths worldwide and increasing in Western countries. We previously identified the transcription factor Zinc Fingers and Homeoboxes 2 (Zhx2) as a regulator of hepatic gene expression, and many Zhx2 target genes are dysregulated in HCC. Here, we investigate HCC in Zhx2-deficient mice using the Diethylnitrosamine (DEN)-induced liver tumor model. Our study using whole-body Zhx2 knock-out (Zhx2KO) mice revealed the complete absence of liver tumors 9 and 10 months after DEN exposure.Analysis soon after DEN treatment showed no differences in expression of the DEN bioactivating enzyme CYP2E1 and DNA polymerase delta 2, or in the numbers of {gamma}H2AX foci between Zhx2KO and wild-type (Zhx2wt) mice. The absence of Zhx2, therefore, did not alter DEN bioactivation or DNA damage. Zhx2KO livers showed fewer positive foci for Ki67 staining and reduced IL-6 and AKT2 expression compared to Zhx2wt livers, suggesting that Zhx2 loss reduces liver cell proliferation and may account for reduced tumor formation. Tumors were reduced but not absent in DEN-treated liver-specific Zhx2 knock-out mice, suggesting that Zhx2 acts in both hepatocytes and non-parenchymal cells to inhibit tumor formation. Analysis of data from The Cancer Genome Atlas and Clinical Proteomic Tumor Consortium indicated that ZHX2 mRNA and protein levels were significantly higher in HCC patients and associated with clinical pathological parameters. ConclusionsIn contrast to previous studies in human hepatoma cell lines and other HCC mouse models showing that Zhx2 acts as a tumor suppressor, our data indicate that Zhx2 acts as an oncogene in the DEN-induced HCC model and is consistent with the higher ZHX2 expression in HCC patients.

cancer biology↗

bioRxiv2019

Empirical characterization factors assessing the effects of hydroelectricity on fish richness across three large biomes

Hydroelectricity is often presented as a clean, reliable, and renewable energy source, but is also recognized for its potential impacts on aquatic ecosystem biodiversity. We used empirical data on change in fish species richness following impoundment to develop Characterisation Factors (CF) and Impact Scores (IS) for hydroelectricity production for use in Life Cycle Assessment (LCA). We used data collected on 89 sampling stations (63 upstream and 26 downstream of a dam) belonging to 27 reservoirs from three biomes (boreal, temperate and tropical). Overall, the impact of hydroelectricity production on fish species richness was significant in the tropics, of smaller amplitude in temperate and minimal in boreal biome, stressing for the need of regionalisation. The impact of hydroelectricity production was also quite consistent across scales (i.e., same directionality and statistical significance across sampling stations, reservoirs and biomes) but was sensitive to the duration of the study (i.e., the period over which data have been collected after impoundment), highlighting the need for a clear understanding of transient situations before reaching steady states. Our CFs and ISs contribute to fill a gap to assist decision makers using LCA to evaluate alternative technologies, such as hydropower, to decarbonize the worldwide economy.\n\nHighlightsO_LIThis paper is the first to develop global and empirically based characterization factors of the impact of hydroelectricity production on aquatic ecosystems biodiversity, to be used in LCA;\nC_LIO_LIThe impact of hydroelectricity production on fish species richness was significant in the tropics, of smaller amplitude in temperate and minimal in boreal biome;\nC_LIO_LIThe impact of hydroelectricity production on fish richness was consistent across scales - same directionality and statistical significance across sampling stations, reservoirs and biomes;\nC_LIO_LIThe impact of hydroelectricity production on fish richness was sensitive to the duration of the study, highlighting the need for a clear understanding of transient situations before reaching steady states in LCA.\nC_LI

ecology↗

bioRxiv2018

Dams have varying impacts on fish communities across latitudes: A quantitative synthesis

Dams are recognized to impact aquatic biodiversity and ecosystem functions, but the magnitude of effects vary across studies. By using a meta-analytical approach, we examined the effects of impoundment on fish community across three large biomes. The impacts of dams on richness and diversity differed across biomes, with significant declines in the tropics, lower amplitude but similar directional changes in temperate reservoirs, and no changes in boreal reservoirs. Our analysis also showed that non-native species increased significantly in tropical and temperate reservoirs, but not in boreal reservoirs. In contrast, temporal trajectories in fish assemblage metrics were common across regions, with all biomes showing an increase in mean trophic position and in the proportion of generalist species after impoundment. Such changes in fish assemblages may affect food web stability and merit closer study. Across the literature examined, predominant factors or mechanisms that render fish assemblages susceptible to impacts from dams were: 1) the transformation of the lotic environment into a lentic environment; 2) habitat fragmentation and 3) invasive or non-native species. Collectively our results highlight that an understanding of the regional context and a suite of metrics are needed to make robust predictions about how fish will respond to river impoundments.

ecology↗

bioRxiv2018

Programmed Variations of Cytokinesis Contribute to Morphogenesis in the C. elegans embryo

While cytokinesis has been intensely studied, how it is executed during development is not well understood, despite a long-standing appreciation that various aspects of cytokinesis vary across cell and tissue types. To address this, we investigated cytokinesis during the invariant C. elegans embryo lineage and found several reproducibly altered parameters at different stages. During early divisions, furrow ingression asymmetry and midbody inheritance is consistent, suggesting specific regulation of these events. During morphogenesis, we find several unexpected alterations including migration of midbodies to the apical surface during epithelial polarization in different tissues. Aurora B kinase, which is essential for several aspects of cytokinesis, remains localized to the apical membrane after internalization of other midbody components. Inactivation of Aurora B causes cytokinesis failure, which disrupts polarization and tissue formation. Therefore, cytokinesis shows surprising diversity during development and is required during epithelial polarization to establish cellular architecture during morphogenesis.

cell biology↗

bioRxiv2017

River impoundments cause little change in fish boreal diversity, but clear species assemblage shifts

O_LIHydroelectricity is often presented as a clean and renewable energy source, but river flow regulation and fragmentation caused by dams are recognized to impact aquatic biodiversity in temperate and tropical ecosystems. However, the effects of boreal river impoundment are not clear as the few studies that exist have not been able to separate the hydrological changes brought about by dams from other factors (e.g. fish stocking, and species introduction).\nC_LIO_LIWe adopted a multi-scale analysis to examine changes in nearshore fish communities over 20 years (spanning before and after impoundment) using a network of 24 sampling stations spread across from four reservoirs and two hydroelectricity complexes located in the boreal region (Northern Quebec, Canada). Given the remote location, confounding factors were minimal.\nC_LIO_LIWe found no strong temporal trends in alpha- and gamma-diversity in impacted stations (upstream and downstream of the dam) relative to reference sites across the three spatial scales. Using beta-diversity analyses, we also detected a high stability in fish composition over time and space at the complex and reservoir scales.\nC_LIO_LIAt the scale of the sampling stations, we observed higher rates of species turnover (beta-diversity) coincident with the time of reservoir filling and shortly after. Likewise, we detected species assemblage shifts that correlated with time since impoundment only at the sampling station scale. This pattern was masked at the complex and reservoir scales.\nC_LIO_LISynthesis and applications. Overall, the isolated effect of impoundment in these remote boreal ecosystems caused no loss of species and little change in fish diversity over 20 years, but resulted in substantial species assemblage shifts. Our work shows that examining community data at different scales is key to understand the anthropogenic impacts on fish biodiversity.\nC_LI

ecology↗