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Tsakiri, E.

Publications and source records attributed to Tsakiri, E..

2 recordsLinked to original sources

RpS12-mediated induction of the Xrp1short isoform links ribosomal protein mutations to cell competition

Cell competition, a universal yet enigmatic phenomenon, eliminates less-fit cells via interactions with their neighbors. It was originally described in Drosophila mosaics, where heterozygous ribosomal protein (Rp+/-) mutant cells are eliminated by wild-type neighbors. The transcription factor Xrp1 mediates most of the Rp+/- -associated phenotypes, including reduced competitiveness and translation. Although RpS12 is required for Xrp1 induction in Rp+/- cells, the mechanism remained unresolved. We demonstrate that RpS12, via alternative splicing, induces the Xrp1 short (Xrp1short) isoform expression in Rp+/- cells, which is both necessary and sufficient for their elimination. Strikingly, RpS12 overexpression in wild-type cells is sufficient to induce Xrp1short expression and confer a "loser" phenotype. While Xrp1long isoform is not required in Rp+/- cells, expression of either Xrp1 isoform is sufficient to promote the loser status in wild-type cells. We further identify Syncrip, an RNA-binding protein reduced in Rp+/- cells, as a critical Xrp1 suppressor; its depletion in wild-type cells activates Xrp1-dependent competition. Our findings establish RpS12s specialized function in Xrp1short promotion, not proteotoxic stress, as the primary driver in Rp+/- cells, providing new perspectives that challenge and refine prevailing models. Our work contributes in long-standing questions about ribosomal protein-linked fitness surveillance and provides insights into ribosomopathy pathologies.

developmental biology↗

Communication between the nucleus and the mitochondria via NDUFS4 alternative splicing in gastric cancer cells

A constant communication between the nucleus and the mitochondria allows both organelles to ensure cellular homeostasis and adaptation to mitochondrial stress. Mitochondrial biogenesis and function are controlled by anterograde regulatory pathways involving a large number of nuclear-encoded proteins. Transcriptional networks controlling the nuclear-encoded mitochondrial genes are known, however alternative splicing (AS) regulation has not been implicated in this communication. Here, we show that IQGAP1, a scaffold protein that regulates AS of distinct subsets of genes in gastric cancer cells, participates in AS regulation that strongly affects mitochondrial respiration. Combined proteomic analyses and RNA-seq profiles of IQGAP1KO and parental cells show that IQGAP1KO alters a specific AS event of the mitochondrial respiratory chain complex I subunit NDUFS4 and downregulates a subset of complex I subunits. In IQGAP1KO cells, respiratory complex I intermediates accumulate resembling assembly deficiencies observed in patients with Leigh syndrome bearing NDUFS4 mutations. Mitochondrial complex I activity is significantly lower in KO compared to parental cells, while exogenous expression of IQGAP1 partially restores NDUFS4 AS pattern and expression and reverses mitochondrial defects of IQGAP1KO cells. Our work sheds light to a novel facet of IQGAP1 in mitochondrial quality control that involves fine-tuning of complex I activity through AS regulation.

molecular biology↗