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Biology subjects

Tridgett, M.

Publications and source records attributed to Tridgett, M..

2 recordsLinked to original sources

Turning of (Ph)age: Expanding the therapeutic potential of our viral allies

Novel strategies for treating bacterial infections are needed to combat the growing threat of antibiotic resistance. Here we engineered P4-like particles for bacterial-culture proof-of-concept experiments in two antimicrobial modes: a single-action design intended to deliver model payloads into bacteria without programmed lysis, and a dual-action design intended to lyse target bacteria while releasing a secondary antigenic payload, exemplified here by model antigens. Using a P2 helper-free P4-like particle production platform, we designed, produced and tested P4-mediated single-and dual-action antimicrobial prototypes. After completing bacterial-culture proof-of-concept experiments, we optimized early-stage bioprocessing for future studies, leading to 1011 plaque forming units (PFU) per mL and 0.25 endotoxin units (EU) per 109 PFU. We also challenged the P4 viral-vector packaging limit by deleting sid to favour packaging into P2-sized capsids ([~]25.8 kb estimated cargo capacity). Importantly, repressing payload expression during particle production improved viral titers by about 2 logs, reduced detected cargo-sequence alterations from 12/20 to 0/20 sequenced post-transduction isolates and enabled higher-dose transduction with stronger detectable antigen signal. Altogether, this study supports P4-derived phage-like particles as antimicrobial prototypes that extend phage function beyond bacterial elimination and provides a basis for future validation in pathogen and animal models of infection.

synthetic biology↗

Comparison of CRISPR and marker based methods for the engineering of phage T7

With the recent rise in interest in using lytic bacteriophages as therapeutic agents, there is an urgent requirement to understand their fundamental biology to enable the engineering of their genomes. Current methods of phage engineering rely on homologous recombination, followed by a system of selection to identify recombinant phages. For bacteriophage T7, the host genes cmk or trx have been used as a selection mechanism along with both type I and II CRISPR systems to select against wild-type phage and enrich for the desired mutant. Here we systematically compare all three systems; we show that the use of marker-based selection is the most efficient method and we use this to generate multiple T7 tail fiber mutants. Furthermore, we found the type II CRISPR-Cas system is easier to use and generally more efficient than a type I system in the engineering of phage T7. These results provide a foundation for the future, more efficient engineering of bacteriophage T7.

molecular biology↗