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Biology subjects

Thiruppathy, M.

Publications and source records attributed to Thiruppathy, M..

3 recordsLinked to original sources

Retinoic acid signaling suppresses chondrocyte identity during cartilage development and regeneration

Cartilage is a dynamic tissue during development, repair, and disease. Within developing endochondral bones, chondrocytes at growth plate edges transition to osteoblasts, adipocytes, and other connective tissue in the marrow cavity, and in diseases such as Multiple Osteochondromas (MO) chondrocytes form abnormally around growth plates and contribute to ectopic bone. On the other hand, the inability to form new chondrocytes to maintain damaged joints contributes to the high incidence of osteoarthritis. In order to assess the ability of zebrafish to regenerate cartilage, we developed a nitroreductase-based cartilage ablation model. Following ablation at larval to adult stages, we observed new chondrocytes forming around the dead cartilage matrix, with cartilage outgrowths in ablated endochondral bones resembling the exostoses of MO. By generating a perichondrium-restricted hyal4:GFP transgenic line, we show that new chondrocytes arise from the perichondrium surrounding the ablated cartilage. In addition, we observe enriched expression of the retinoic acid (RA) synthesis gene aldh1a2 in the perichondrium following ablation, and the RA degrading enzyme gene cyp26b1 in newly forming chondrocytes. Consistent with RA signaling suppressing chondrogenesis, treatment with the RA receptor gamma agonist palovarotene, which has been used to treat MO, prevented ablation-induced chondrogenesis. Although we find that BMP signaling is also required for ablation-induced chondrogenesis, we show a distinct role for RA signaling in suppressing sox9a expression and chondrogenesis. Moreover, palovarotene resulted in a near complete loss of growth plates in uninjured zebrafish, which was due to the precocious dedifferentiation and exit of chondrocytes from the growth plate. Our findings suggest a common chondrocyte suppressive role of RA signaling within the developing growth plates and regenerating perichondrium, which may explain the growth plate defects observed when using RA agonists to treat MO.

developmental biology↗

Gill developmental program in the teleost mandibular arch

Whereas no known living vertebrate possesses gills derived from the jaw-forming mandibular arch, it has been proposed that the jaw arose through modifications of an ancestral mandibular gill. Here we show that the zebrafish pseudobranch, which regulates blood pressure in the eye, develops from mandibular arch mesenchyme and first pouch epithelia and shares gene expression, enhancer utilization, and developmental gata3 dependence with the gills. Combined with work in chondrichthyans, our findings in a teleost fish point to the presence of a mandibular pseudobranch with serial homology to gills in the last common ancestor of jawed vertebrates, consistent with a gill origin of vertebrate jaws.

developmental biology↗

Lifelong single-cell profiling of cranial neural crest diversification

The cranial neural crest generates a huge diversity of derivatives, including the bulk of connective and skeletal tissues of the vertebrate head. How neural crest cells acquire such extraordinary lineage potential remains unresolved. By integrating single-cell transcriptome and chromatin accessibility profiles of cranial neural crest-derived cells across the zebrafish lifetime, we observe region-specific establishment of enhancer accessibility for distinct fates. Neural crest-derived cells rapidly diversify into specialized progenitors, including multipotent skeletal progenitors, stromal cells with a regenerative signature, fibroblasts with a unique metabolic signature linked to skeletal integrity, and gill-specific progenitors generating cell types for respiration. By retrogradely mapping the emergence of lineage-specific chromatin accessibility, we identify a wealth of candidate lineage-priming factors, including a Gata3 regulatory circuit for respiratory cell fates. Rather than multilineage potential being an intrinsic property of cranial neural crest, our findings support progressive and region-specific chromatin remodeling underlying acquisition of diverse neural crest lineage potential. HighlightsO_LISingle-cell transcriptome and chromatin atlas of cranial neural crest C_LIO_LIProgressive emergence of region-specific cell fate competency C_LIO_LIChromatin accessibility mapping identifies candidate lineage regulators C_LIO_LIGata3 function linked to gill-specific respiratory program C_LI Graphical Abstract O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=173 SRC="FIGDIR/small/456710v1_ufig1.gif" ALT="Figure 1"> View larger version (69K): org.highwire.dtl.DTLVardef@1c4ca91org.highwire.dtl.DTLVardef@cf0d10org.highwire.dtl.DTLVardef@162bfe9org.highwire.dtl.DTLVardef@2565fd_HPS_FORMAT_FIGEXP M_FIG C_FIG

developmental biology↗