Biology subjects

Taulu, S.

Publications and source records attributed to Taulu, S..

6 recordsLinked to original sources

bioRxiv2026

Noise Optimization of Basic Signal Component Extraction for Cryogenic and On-Scalp Magnetoencephalography (MEG)

Magnetoencephalography (MEG) measures human neural activity non-invasively with spatio-temporal precision, and has been foundational in enabling impactful discoveries in cognitive neuroscience. New on-scalp MEG sensor technologies, such as OPM-MEG, offer the opportunity to capture more information about the neuronal magnetic fields with higher sensitivity to more complex, higher order spatial components, leading to improved source localization. The accuracy of MEG and OPM-MEG source localization relies on data preprocessing techniques to isolate the neuronal fields from other magnetic and biomagnetic sources through signal space separation, rejection, and suppression methods. Current preprocessing methods risk rejecting brain signals of interest, or can spread sensor noise artifacts unknowingly. Here we propose a novel preprocessing method for MEG, and test the extent to which it overcomes limitations of prior methods. Specifically, we derive, apply, and assess a novel signal space separation (SSS) method with Fosters inverse, a weighted matrix inversion protocol that can utilize information about the MEG sensor noise and artifacts to reconstruct neuronal activity. With simulations, phantom head cryogenic MEG recordings, and subject recordings with two OPM-MEG systems, we show that Fosters inverse with SSS offers a more robust and stable reconstruction of the neuronal magnetic fields, especially in the face of sensor noise and artifacts. As the field of cognitive neuroscience continues to embrace MEG and OPM-MEG, Fosters inverse with SSS offers a robust and powerful data preprocessing technique for reducing noise and improving source localization of the underlying neuronal currents.

neuroscience↗

bioRxiv2023

Robust estimation of brain stimulation evoked responses using magnetoencephalography

Magnetoencephalography (MEG) recordings are often contaminated by interference that can exceed the amplitude of physiological brain activity by several orders of magnitude. Furthermore, activity of interference sources may leak into the activity of brain signals of interest, resulting in source estimation inaccuracies. This problem is particularly apparent when using MEG to interrogate the effects of brain stimulation on large scale cortical networks. This technical report offers two contributions. Firstly, using phantom MEG recordings we describe an approach for validating the estimation accuracy of brain stimulation evoked responses. Secondly, we propose a novel denoising method for suppressing the leakage of stimulation related signal into recorded brain activity. This approach leverages spatial and temporal domain projectors for signal arising from prespecified anatomical regions of interest. We highlight its advantages compared to the benchmark - spatiotemporal signal space separation (tSSS) - and show that it can more accurately reveal brain stimulation evoked responses.

bioengineering↗

bioRxiv2022

Reading instruction causes changes in category-selective visual cortex

Education sculpts specialized neural circuits for skills like reading that are critical to success in modern society but were not anticipated by the selective pressures of evolution. Does the emergence of brain regions that selectively process novel visual stimuli like words occur at the expense of cortical representations of other stimuli like faces and objects? To answer this question we conducted a randomized controlled trial with pre-school children (five years of age). We found that being taught reading versus oral language skills induced different patterns of change in category-selective regions of visual cortex. Reading instruction enhanced the response to text but did not diminish the response to other categories. How these changes play out over a longer timescale is still unknown but, based on these data, we can surmise that high-level visual cortex undergoes rapid changes as children enter school and begin establishing new skills like literacy.

neuroscience↗

bioRxiv2019

Neocortical activity tracks syllable and phrasal structure of self-produced speech

To gain novel insights into how the human brain processes self-produced auditory information during reading aloud, we investigated the coupling between neuromagnetic activity and the temporal envelope of the heard speech sounds (i.e., speech brain tracking) in a group of adults who 1) read a text aloud, 2) listened to a recording of their own speech (i.e., playback), and 3) listened to another speech recording. Coherence analyses revealed that, during reading aloud, the readers brain tracked the slow temporal fluctuations of the speech output. Specifically, auditory cortices tracked phrasal structure (<1 Hz) but to a lesser extent than during the two speech listening conditions. Also, the tracking of syllable structure (4-8 Hz) occurred at parietal opercula during reading aloud and at auditory cortices during listening. Directionality analyses based on renormalized partial directed coherence revealed that speech brain tracking at <1 Hz and 4-8 Hz is dominated by speech-to-brain directional coupling during both reading aloud and listening, meaning that speech brain tracking mainly entails auditory feedback processing. Nevertheless, brain-to-speech directional coupling at 4- 8 Hz was enhanced during reading aloud compared with listening, likely reflecting speech monitoring before production. Altogether, these data bring novel insights into how auditory verbal information is tracked by the human brain during perception and self-generation of connected speech.\n\nHighlightsO_LIThe brain tracks phrasal and syllabic rhythmicity of self-produced (read) speech.\nC_LIO_LITracking of phrasal structures is attenuated during reading compared with listening.\nC_LIO_LISpeech rhythmicity mainly drives brain activity during reading and listening.\nC_LIO_LIBrain activity drives syllabic rhythmicity more during reading than listening.\nC_LI

neuroscience↗

bioRxiv2017

MEG/EEG group study with MNE: recommendations, quality assessments and best practices

Cognitive neuroscience questions are commonly tested with experiments that involve a cohort of subjects. The cohort can consist of a handful of subjects for small studies to hundreds or thousands of subjects in open datasets.\n\nWhile there exist various online resources to get started with the analysis of magnetoencephalography (MEG) or electroencephalography (EEG) data, such educational materials are usually restricted to the analysis of a single subject. This is in part because data from larger group studies are harder to share, but also analyses of such data are often require subject-specific decisions which are hard to document.\n\nThis work presents the results obtained by the reanalysis of an open dataset from Wakeman and Henson (2015) using the MNE software package. The analysis covers preprocessing steps, quality assurance steps, sensor space analysis of evoked responses, source localization, and statistics in both sensor and source space. Results with possible alternative strategies are presented and discussed at different stages such as the use of high-pass filtering versus baseline correction, tSSS versus SSS, the use of a minimum norm inverse versus LCMV beamformer, and the use of univariate or multivariate statistics. This aims to provide a comparative study of different stages of M/EEG analysis pipeline on the same dataset, with open access to all of the scripts necessary to reproduce this analysis.

neuroscience↗

bioRxiv2017

Left-Lateralized Contributions of Saccades to Cortical Activity during a One-Back Word Recognition Task

Saccadic eye movements are an inherent component of natural reading, yet their contribution to information processing at subsequent fixation remains elusive. Here we use anatomically-constrained magnetoencephalography (MEG) to examine cortical activity following saccades as healthy human subjects engaged in a one-back word recognition task. This activity was compared with activity following external visual stimulation that mimicked saccades. A combination of procedures were employed to eliminate saccadic ocular artifacts from the MEG signal. Both saccades and saccade-like external visual stimulation produced early-latency responses beginning ~70 ms after onset in occipital cortex and spreading through the ventral and dorsal visual streams to temporal, parietal and frontal cortices. Robust differential activity following the onset of saccades versus similar external visual stimulation emerged during 150-350 ms in a left-lateralized cortical network. This network included (i) left lateral occipitotemporal and nearby inferotemporal cortex, (ii) left posterior Sylvian fissure and nearby multimodal cortex, and (iii) medial parietooccipital, posterior cingulate and retrosplenial cortices. Moreover, this left-lateralized network colocalized with word repetition priming effects. Together, results suggest that central saccadic mechanisms influence a left-lateralized language network in occipitotemporal and temporal cortex above and beyond saccadic influences at preceding stages of information processing during visual word recognition.

neuroscience↗