Biology subjects

Tamma, K.

Publications and source records attributed to Tamma, K..

6 recordsLinked to original sources

bioRxiv2021

An arachnid's guide to be an ant: morphological and behavioural mimicry in ant-mimicking spiders

Batesian mimicry imposes several challenges to mimics and evokes adaptations in multiple sensory modalities. Myrmecomorphy, morphological and behavioral resemblance to ants, is seen in over 2000 arthropod species. Ant-like resemblance is observed in at least 13 spider families despite spiders having a distinct body plan compared to ants. Quantifying the extent to which spiders shape, size, and behavior resemble model ants will allow us to comprehend the evolutionary pressures that have facilitated myrmecomorphy. Myrmaplata plataleoides are accurate mimics of the weaver ants, Oecophylla smaragdina. In this study, we quantify the speed of movement of model, mimic, and non-mimetic jumping spiders. We use traditional and geometric morphometrics to quantify traits such as foreleg and hindleg size, body shape between the model ant, mimic, and non-mimics. Our results suggest that while the mimics closely resemble the model ants in speed of movement, they occupy an intermediate morphological space compared to the model ants and non-mimics. We suggest that ant-mimicking spiders are better at mimicking ants locomotory movement than morphology and overall body shape. Our study provides a framework to understand the multimodal nature of mimicry and helps discern the relative contributions of such traits that drive mimetic accuracy in ant-mimicking spiders.

animal behavior and cognition↗

bioRxiv2021

Characterising the vegetation-rainfall relationship in the Northeast Himalaya, India

Ecosystems are complex systems and are characterised by positive and negative feedbacks between the abiotic and biotic components. The response of an ecosystem to its environment can be determined by examining state diagrams, which are plots of the state variable as a function of the environmental driver. For instance, tree cover as a function of rainfall is widely used to characterise vegetation patterns. Previous studies have shown that tree cover shows bimodal distributions for intermediate rainfall regimes in Africa and South America. In this study, we construct a vegetation state diagram - by plotting vegetation cover as a function of mean annual rainfall - for Northeast India, which is part of the Eastern Himalaya and the Indo-Burma biodiversity hotspot. We use remotely sensed satellite data of Enhanced Vegetation Index (EVI) as a proxy for vegetation cover. We obtain Mean Annual Precipitation (MAP) from the CHIRPS data (Climate Hazards Group InfraRed Precipitation with Station data). We find that EVI increases monotonically as a function of MAP in the range 1000-2000 mm, after which it plateaus. The 1000 to 2000 mm MAP corresponds to the vegetation transitional zone (1200-3700 m), whereas >2000 MAP region covers the greater extent of the tropical forest (<1200 m) of NEI. In other words, we find no evidence for bimodality in tree cover or vegetation states at coarser scales in North Eastern India. Our characterisation of the state diagram for vegetation in northeast India is important to understand response to ongoing change in rainfall patterns.

ecology↗

bioRxiv2021

Patterns of morphological diversification in the Ramphastoidea reveal the dramatic divergence of toucans from a conserved morphotype

BackgroundMorphological traits offer insights into an organisms ecological niche, species interactions, and patterns of community organisation. Pantropical lineages - animals and plants distributed across the three tropical continental regions of Asia, Africa, and America - provide a way to test how different environments and communities influence morphological diversification. Here, we examined a monophyletic group of frugivorous birds, the barbets and toucans (Ramphastoidea), which diversified independently on three continents, to investigate whether clades in each region exhibit similar (phylogenetically constrained) or distinct (ecologically influenced) patterns of morphological diversification. ResultsOur results show that despite differences in community dynamics in these regions, lineage accumulation patterns through time on all three continents are broadly similar, putatively due to phylogenetic niche conservatism. We quantified morphological variation in light of phylogenetic relatedness to further reveal that all barbet lineages across continents occupy a conserved region of morphospace after correcting for variation in size. However, in the Neotropics, one lineage, the toucans, have diverged dramatically from typical barbet space and converged toward (yet are distinct from) the trait space occupied by the distantly related hornbills in Asia and Africa. Additionally, we found no link between climatic variables and morphological traits. We conclude that barbets exhibit a conserved morphotype across continents and have diversified by scaling mainly in body size. However, the absence of other large frugivorous birds may have allowed toucans to diversify into a different region of morphospace of increased bill/wing to tail/wing ratios. ConclusionsA combination of photographic and specimen measurements enabled us to demonstrate the presence of a globally conserved barbet morphotype across three tropical continents. By examining different continental lineages of a single monophyletic bird group, we shed light on the contrasting effects of regional ecological factors and phylogenetic constraints on morphological diversification.

ecology↗

bioRxiv2019

Visual signal evolution along complementary color axes in four bird lineages

Animal color patterns function in varied behavioral contexts including recognition, camouflage and even thermoregulation. The diversity of visual signals may be constrained by various factors, for example, dietary factors, and the composition of ambient environmental light (sensory drive). How have high-contrast and diverse signals evolved within these constraints? In four bird lineages, we present evidence that plumage colors cluster along a line in tetrachromatic color space. Additionally, we present evidence that this line represents complementary colors, which are defined as opposite sides of a line passing through the achromatic point (putatively for higher chromatic contrast). Finally, we present evidence that interspecific color variation over at least some regions of the body is not constrained by phylogenetic relatedness. Thus, we hypothesize that species-specific plumage patterns within these bird lineages evolve by swapping the distributions of a complementary color pair (or dark and light patches in one group, putatively representing an achromatic complementary axis). The relative role of chromatic and achromatic contrasts in discrimination may depend on the environment that each species inhabits.

ecology↗

bioRxiv2017

Complete assembly of a dengue virus type 3 genome from a recent genotype III clade by metagenomic sequencing of serum

BackgroundMosquito-borne flaviviruses causing diseases such as dengue and Japanese encephalitis are devastating, particularly in the tropics. Although, multiple flaviviruses are known to co-circulate in India, when a patient presents with febrile illness, testing is usually limited to specific pathogens. Unbiased metagenomic sequencing of febrile cases can reveal the presence of multiple pathogens and provide complete genome information. Sequence information, a cornerstone for tracing virus evolution, is relevant for the design of vaccines and therapeutics. In order to assess the usefulness of unbiased metagenomic sequencing for the identification of viruses associated with febrile illness, we sequenced serum from four individuals and plasma from one individual, all hospitalized at a tertiary care centre in South India with severe or prolonged febrile illnesses, together with one healthy control in 2014.\n\nResultsWe identified and assembled a complete dengue virus type 3 (DENV3) sequence from the serum of a case classified as severe dengue. We also found a small number of Japanese encephalitis virus (JEV) sequences in the serum of two adults with febrile illness, including the one who had dengue. Phylogenetic analysis of the dengue sequence indicates that it belongs to a predominantly Asian, DENV3, genotype III clade. It had an estimated divergence time of 13.86 years (95% Highest Posterior Densities 12.94 - 14.83 years) with the closest Indian strain. Amino acid substitutions were present throughout the sequenced genome, including 11 substitutions in the antigenic envelope protein compared to the strain used for the development of the first commercial dengue vaccine. Of these one substitution (E361D) was unique and six were in critical antigenic sites.\n\nConclusionsWe demonstrate that both genome assembly and detection of a low number of viral sequences are possible by unbiased sequencing of clinical material. Complete dengue virus sequence analysis places the sequenced genome in a recent, predominantly Asian clade within genotype III of DENV3. The detection of JEV, an agent not routinely tested in febrile illness in India, warrants further analysis and highlights the need to study co-circulating flaviviruses in parallel.

microbiology↗

bioRxiv2017

Inferring critical points of ecosystem transitions from spatial data

Ecosystems can undergo abrupt transitions from one state to an alternative stable state when the driver crosses a threshold or a critical point. Dynamical systems theory suggests that systems take long to recover from perturbations near such transitions. This leads to characteristic changes in the dynamics of the system, which can be used as early warning signals of imminent transitions. However, these signals are qualitative and cannot quantify the critical points. Here, we propose a method to estimate critical points quantitatively from spatial data. We employ a spatial model of vegetation that shows a transition from vegetated to bare state. We show that the critical point can be estimated as the ecosystem state and the driver values at which spatial variance and autocorrelation are maximum. We demonstrate the validity of this method by analysing spatial data from regions of Africa and Australia that exhibit alternative vegetation biomes.

ecology↗