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Suleimanova, A.

Publications and source records attributed to Suleimanova, A..

3 recordsLinked to original sources

Mitigating activity mixing with personalized whole-brain modeling

Mechanistic neuroimaging-based biomarkers based on localized brain activities or interactions are a central tenet in precision and personalized psychiatry. However, their accuracy may be limited by Activity Mixing that is a novel construct indicating the entanglement of any local neuronal activity with activities elsewhere in the network through long-range spatiotemporal correlations, which degrades the localization of brain-symptom associations. Here, we posit that the ill-posed inverse problem of activity mixing can be mitigated by fitting of generative whole-brain models. We developed a multi-objective fitting approach to estimate subject-specific local- and inter-areal brain-dynamics control parameters from neuroimaging observables. By integrating both synchronization and criticality metrics, this approach yields personalized parameters capture individual brain network dynamics more accurately than raw observables. In silico validation demonstrated that fitted model parameters improved brain-symptom correlation estimates by 30-85% and reduced false-negative rates by approximately [~]67% relative to conventional observables-based analyses. As in vivo proof-of-concept, resting-state magnetoencephalography (MEG) data from 230 patients with major depressive disorder (MDD) showed that aberrant brain criticality in the alpha-frequency band (11 Hz) was a significant predictor of disability with a correlation coefficient of 0.236 (95% confidence interval (CI) = [0.206, 0.266]) in 27 (CI = [23, 31]) significant cortical parcels. Model fitting both improved this correlation estimate by [~]56% up to 0.368 (CI = [0.341, 0.405]) and localized it [~]25% more narrowly to 20 (CI = [18, 22]) parcels. These findings suggest that model fitting can mitigate the effects of activity mixing and provide control-parameter estimates that delineate mechanistic biomarkers for brain disorders more accurately than the raw brain imaging observables.

neuroscience↗

CROCOpy - A Python toolbox for the analysis of CRitical Oscillations and COnnectivity

CROCOpy is a light-weighted toolbox for the assessment of neuronal oscillations, and multiple observables of functional connectivity (phase synchronization, amplitude coupling, and cross-frequency coupling) and critical dynamics (avalanches, long-range temporal correlations, bistability, and functional excitation-inhibition ratio). It was developed to simplify the analysis of continuous electrophysiological recordings and, in addition to metric computation, also includes methods for narrow-band filtering and statistical analysis. It is device-agnostic and supports both GPU and CPU computations. The toolbox also provides detailed tutorials.

neuroscience↗

Hierarchical model of human brain oscillations

The brain operates at the critical transition between order and disorder which supports optimal information processing. Whole-brain computational modeling is a powerful tool for uncovering the system-level mechanisms behind large-scale brain activity in both healthy and pathological states. However, most previous approaches have focused on either functional connectivity or criticality, making it difficult to capture both aspects simultaneously. Here, we introduce a new method based on a Hierarchical Kuramoto model that incorporates two levels of hierarchy. In our model, each node contains a large number of coupled oscillators, which allows us to examine both local synchronization and long-distance interactions between brain regions. The model produces critical-like dynamics marked by emergent long-range temporal correlations (LRTCs) and both inter-areal phase synchronization and amplitude correlations during the transition from asynchronous to synchronous states. Notably, structure-function coupling shows distinct patterns: correlations with structural connectivity peak at criticality for LRTCs and amplitude correlations, but decay for local and inter-areal phase synchronization. Comparisons with human resting-state magnetoencephalography (MEG) data reveal that the models behavior most closely resembles MEG phase synchronization and multi-peak power spectra on the subcritical side of an extended critical regime, supporting the hypothesis that the human brain operates in this state.

neuroscience↗