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Biology subjects

Subramanian, E.

Publications and source records attributed to Subramanian, E..

2 recordsLinked to original sources

Myogenic dedifferentiation involves a p53-dependent reorganization of PLK4 localization during centrosome regeneration

Multinucleated skeletal muscle cells are stably withdrawn from the cell cycle in most vertebrates. Muscle dedifferentiation is however naturally occurring during limb regeneration in newts and can be artificially induced in mammalian myotubes. Dedifferentiation involves fragmentation of myofibers and myotubes into mononucleate cells which subsequently reenter the cell cycle, and give rise to proliferative progeny. Here we addressed the dynamics of centrosomes, which are key organelles for cell proliferation during myogenic differentiation and dedifferentiation. We show that, in contrast to their mammalian counterparts, newt muscle cells retain centrosomes during differentiation and demonstrate that regeneration of centrosomes in dedifferentiated mouse muscle cells depends on inhibition of the tumor suppressor p53. We also find that regulation of the subcellular localization of Polo-Like Kinase 4 rather than its expression level is a hallmark of myogenic differentiation and dedifferentiation, identifying a novel cellular process underlying the plasticity of the differentiated state.

developmental biology↗

Sequencing and chromosome-scale assembly of the giant Pleurodeles waltl genome

The Iberian ribbed newt (Pleurodeles waltl) constitutes a central model for probing the basis of vertebrate regeneration. Here, we present the sequencing and chromosome-scale assembly of the 20.3Gb P. waltl genome, which exhibits the highest level of contiguity and completeness among giant genome assemblies. We uncover that DNA transposable elements are the major contributors to its expansion, with hAT transposons comprising a large portion of repeats. Several hATs are actively transcribed and differentially expressed during adult P. waltl limb regeneration, along with domesticated hAT transposons of the ZBED transcription factor family. Despite its size, syntenic relationships are conserved. As an example, we show the high degree of conservation of the regeneration-associated Tig1 locus with several neighbouring genes. Together, the P. waltl genome provides a fundamental resource for the study of regenerative, developmental and evolutionary principles.

developmental biology↗