Search bioRxivSearch

Biology subjects

Strogatz, S. H.

Publications and source records attributed to Strogatz, S. H..

2 recordsLinked to original sources

Evolutionary Dynamics Of Incubation Periods

The incubation period of a disease is the time between an initiating pathologic event and the onset of symptoms1. For typhoid fever2,3, polio4, measles5, leukemia6 and many other diseases7-10, the incubation period is highly variable. Some affected people take much longer than average to show symptoms, leading to a distribution of incubation periods that is right skewed and often approximately lognormal8-10. Although this statistical pattern was discovered more than sixty years ago8, it remains an open question to explain its ubiquity11. Here we propose an explanation based on evolutionary dynamics on graphs12-18. For simple models of a mutant or pathogen invading a network-structured population of healthy cells, we show that skewed distributions of incubation periods emerge for a wide range of assumptions about invader fitness, competition dynamics, and network structure. The skewness stems from stochastic mechanisms associated with two classic problems in probability theory: the coupon collector and the random walk19,20. Unlike previous explanations11,21 that rely crucially on heterogeneity, our results hold even for homogeneous populations. Thus, we predict that two equally healthy individuals subjected to equal doses of equally pathogenic agents may, by chance alone, show remarkably different time courses of disease.

evolutionary biology

Takeover times for a simple model of network infection

We study a stochastic model of infection spreading on a network. At each time step a node is chosen at random, along with one of its neighbors. If the node is infected and the neighbor is susceptible, the neighbor becomes infected. How many time steps T does it take to completely infect a network of N nodes, starting from a single infected node? An analogy to the classic \"coupon collector\" problem of probability theory reveals that the takeover time T is dominated by extremal behavior, either when there are only a few infected nodes near the start of the process or a few susceptible nodes near the end. We show that for N >> 1, the takeover time T is distributed as a Gumbel for the star graph; as the sum of two Gumbels for a complete graph and an Erd[o]s-Renyi random graph; as a normal for a one-dimensional ring and a two-dimensional lattice; and as a family of intermediate skewed distributions for d-dimensional lattices with d [≥] 3 (these distributions approach the sum of two Gumbels as d approaches infinity). Connections to evolutionary dynamics, cancer, incubation periods of infectious diseases, first-passage percolation, and other spreading phenomena in biology and physics are discussed.

evolutionary biology