Biology subjects

Sohm, F.

Publications and source records attributed to Sohm, F..

5 recordsLinked to original sources

bioRxiv2026

Rewiring Fibroblast-Muscle Axis Drives Progressive Pathology in Bethlem Myopathy

Collagen VI-related myopathies, including Bethlem myopathy (BM), are progressive muscle disorders, but the mechanisms driving age-dependent disease progression remain poorly understood. Here, we used a zebrafish BM model carrying an exon-skipping mutation that generates a shorter collagen VI 1 chain and disrupts supramolecular assembly, recapitulating key features of the human disease. We further demonstrated that this model reproduces disease progression, with worsening muscle wasting, increased myofiber size variability, and age-associated skeletal deformities consistent with secondary consequences of muscle dysfunction rather than intrinsic bone defects. Single-nucleus RNA sequencing of trunk skeletal muscle revealed an early shift in cellular composition, with reduced myonuclei and increased fibroblast abundance, indicative of disease-associated aging. Myonuclei activated stress and quality control pathways, including autophagy and mitophagy, along with metabolic rewiring. In contrast, fibroblasts displayed early translational activation followed by progressive proteostatic and endoplasmic reticulum stress. At later stages, fibroblasts adopted a pro-fibrotic state, driving extracellular matrix remodeling and enhanced muscle-fibroblast communication. Consistently, analyses at the protein level confirmed early intracellular retention of the mutant protein, along with increased extracellular matrix deposition and fibrotic tissue formation in BM muscle. Among the three tested drugs targeting ER-stress and protein degradation, only TUDCA significantly ameliorated collagen VI deposition in the extracellular space in larvae. These findings identify fibroblasts as key drivers of disease progression and potential therapeutic targets.

developmental biology↗

bioRxiv2025

Col6 deficiency in a zebrafish model of Bethlem myopathy leads to dysfunction of the muscle dihydropyridine receptor

Bethlem myopathy (BM) results from mutations in genes encoding one of the three chains of collagen VI (ColVI). This muscle disease is characterized by skeletal muscle weakness and wasting worsening with age. How alteration in ColVI present outside muscle fibers in the extracellular matrix induces dysfunction within muscle fibers is still misunderstood. Here we explored intracellular Ca2+ handling properties in isolated fast skeletal muscle fibers from adult zebrafish harboring a mutation (col6a1{Delta}ex14) that is the most frequently found in BM patients. Col6a1{Delta}ex14 fish muscle exhibited progressive loss of ColVI deposition, defects in basement membrane and ColVI intracellular accumulation. By combining voltage-clamp and intracellular Ca2+ measurements on isolated fibers, we showed that voltage-dependence of intramembrane charge movements produced by the activation of CaV1.1 controlling sarcoplasmic reticulum (SR) Ca2+ release and voltage-dependence of depolarization-induced SR Ca2+ release were shifted toward negative potentials in col6a1{Delta}ex14 fish. These changes in voltage-dependence gave rise to larger SR Ca2+ leak at voltages close to resting values and to higher frequency of spontaneous SR Ca2+ release elementary events in mutant fish. Trunk muscle force and swimming performance were also found to be reduced in col6a1{Delta}ex14 fish and mis-localization of CaV1.1 subunits clusters was observed in mutant fibers t-tubules. These data indicate that ColVI deficiency in BM leads to CaV1.1 dysfunction that contributes to promote a pathogenic SR Ca2+ leak responsible for progressive muscle weakness and wasting. CaV1.1 could represent the still elusive transmembrane link allowing altered myomatrix to transduce pathogenic signals within muscle.

pathology↗

bioRxiv2021

The myotendinous junction marker collagen XXII enables zebrafish postural control learning and optimal swimming performance through its force transmission activity

Although the myotendinous junction (MTJ) is essential for skeletal muscle integrity, its contribution to skeletal muscle function remains largely unknown. Here, we show that CRISPR-Cas9-mediated gene ablation of the MTJ marker col22a1 in zebrafish identifies two distinctive phenotypic classes: class 1 individuals reach adulthood with no overt muscle phenotype while class 2 display severe movement impairment and eventually dye before metamorphosis. Yet mutants that are unequally affected are all found to display defective force transmission attributed to a loss of ultrastructural integrity of the MTJ and myosepta, though with distinct degrees of severity. The behavior-related consequences of the resulting muscle weakness similarly reveal variable phenotypic expressivity. Movement impairment at the critical stage of swimming postural learning eventually causes class 2 larval death by compromising food intake while intensive exercise is required to uncover a decline in muscle performance in class 1 adults. By confronting MTJ gene expression compensation and structural, functional and behavioral insights of MTJ dysfunction, our work unravels variable expressivity of col22a1 mutant phenotype. This study also underscores COL22A1 as a candidate gene for myopathies associated with dysfunctional force transmission and anticipates a phenotypically heterogeneous disease.

developmental biology↗

bioRxiv2020

FGFR3 is a positive regulator of osteoblast expansion and differentiation during zebrafish skull vault development

Gain- or loss-of-function mutations in fibroblast growth factor receptor 3 (FGFR3) result in cranial vault defects - highlighting the proteins role in membranous ossification. Zebrafish express high levels of fgfr3 during skull development; in order to study FGFR3s role in cranial vault development, we generated the first fgfr3 loss-of-function zebrafish (fgfr3lof/lof). The mutant fish exhibited major changes in the craniofacial skeleton, with a lack of sutures, abnormal frontal and parietal bones, and the presence of ectopic bones. Integrated analyses (in vivo imaging, and single-cell RNA sequencing of the osteoblast lineage) of zebrafish fgfr3lof/lof revealed a delay in osteoblast expansion and differentiation, together with changes in the extracellular matrix. These findings demonstrate that fgfr3 is a positive regulator of osteogenesis. We hypothesize that changes in the extracellular matrix within growing bone impair cell-cell communication, mineralization, and new osteoblast recruitment.

developmental biology↗

bioRxiv2019

Morphogenetic and patterning defects explain the coloboma phenotype of the eye in the Mexican cavefish

The morphogenesis of the vertebrate eye consists of a complex choreography of cell movements, tightly coupled to axial regionalization and cell type specification processes. Disturbances in these events can lead to developmental defects and blindness. Here, we have deciphered the sequence of defective events leading to coloboma in the embryonic eye of the blind cavefish of the species Astyanax mexicanus. Using comparative live imaging on targeted enhancer-trap Zic1:hsp70:GFP reporter lines of both the normal, river-dwelling morph and the cave morph of the species, we identified defects in migratory cell behaviors during evagination which participate in the reduced optic vesicle size in cavefish, without proliferation defect. Further, impaired optic cup invagination shifts the relative position of the lens and contributes to coloboma in cavefish. Based on these results, we propose a developmental scenario to explain the cavefish phenotype and discuss developmental constraints to morphological evolution. The cavefish eye appears as an outstanding natural mutant model to study molecular and cellular processes involved in optic region morphogenesis.

developmental biology↗