Sivaraman, S. | Search bioRxiv

bioRxiv2026

The aging mouse lipidome

Aging is associated with widespread metabolic changes that contribute to functional decline and disease. While prior studies have characterized age-associated changes in lipids, it still remains incompletely understood how the lipidome changes across tissues and between sexes during aging. Here, we performed targeted lipidomics across 10 organs collected from male and female mice at five ages spanning adolescence to old age. We analyzed 775 lipids across multiple lipid classes and found that aging affects the lipidome in an organ-specific manner. The thymus and quadriceps muscle had the most age-associated lipid changes, whereas lipid levels in organs such as the kidney and lung remained more stable. In quadriceps muscle, aging was associated with a decrease in specific phosphatidylcholine and phosphatidylethanolamine lipids, particularly those containing adrenic acid. We also identified sex-dependent differences in lipid composition, with the spleen showing differences throughout life. Spleens from female mice had lower levels of lysophosphatidylcholine and lysophosphatidylethanolamine compared to males. Together, these data provide a comprehensive atlas of age- and sex-associated lipid changes across mouse organs and complement existing metabolic and transcriptomic resources to support studies of mouse aging.

molecular biology↗

bioRxiv2024

Diversity and abundance of tree microhabitats in the tropical forests of southern Western Ghats, India

Tree microhabitats (TMHs) are proven tools for assessing and monitoring diversity. These structures on trees are potential indicators of biota, but there is a huge gap in TMH-related knowledge from the tropical regions, the cradles of biodiversity. Thus, an inventory was made to document the TMHs in the tropical forests of southern Western Ghats, India. In evergreen forests, 3,637 TMH host and 450 cavity host trees were identified from the 6,363 trees sampled. The density of TMHs was 972.57{+/-}341.25 ha-1 and cavity density was 63.13{+/-}11.91 ha-1. In moist deciduous forests, out of 1,545 trees sampled, 1,108 hosted TMHs and 212 trees hosted cavities. The density of TMHs was 493.67{+/-}133.28 ha-1 and cavity density was 42.00{+/-}15.01 ha-1. TMHs were categorised into nine categories and 33 sub-categories. The TMH and cavity occurrences were significantly influenced by species richness, stand density, basal area, diameter and height of trees, and density of healthy, unhealthy and dead trees. Dominant and codominant individuals hosted more TMHs and cavities in the deciduous stands while in evergreen, intermediate and overtopped trees had more TMHs and intermediate and codominant had more cavities. In both the habitats the important species of the habitat were also major hosts for TMHs and cavities. HighlightsO_LIPrimary inventory of diversity of TMHs and their host trees in tropical forests C_LIO_LITMH and cavity occurrences are significantly influenced by stand characteristics C_LIO_LIKey species in the habitats also form major hosts for TMHs and cavities C_LIO_LIDominant and codominant individuals host more TMHs and cavities in deciduous stands C_LIO_LIIntermediate and overtopped trees host more TMHs, intermediate and codominant host more cavities in evergreen C_LI

ecology↗