Search bioRxiv⌕ Search

Biology subjects

Simmonds, E. G.

Publications and source records attributed to Simmonds, E. G..

2 recordsLinked to original sources

Uncertainty propagation in matrix population models: gaps, importance, and guidelines

O_LIMatrix population models (MPMs), which describe the demographic behaviour of a population based on age or stage through discrete time, are popular in ecology, evolutionary biology, and conservation biology. MPMs provide a tool for guiding management decisions and can give insight into life history trade-offs, patterns of senescence, transient dynamics, and population trajectories. These models are parameterised with estimates of vital rates (e.g. survival and reproduction) and can have multiple layers of underlying statistical analyses, all of which introduce uncertainty. For accurate and transparent results, this uncertainty should be propagated through to quantities derived from the MPMs. However, full propagation is not always achieved, leading to omitted uncertainty, and negative consequences for the reliability of inferences drawn. C_LIO_LIWe summarised the state-of-the-art regarding vital rate uncertainty reporting and propagation, by reviewing papers using MPMs from 2010-2019. We then used reported uncertainties as the basis for a simulation study to explore the impact of uncertainty omission on inferences drawn from the analysis of MPMs. We simulated four scenarios of vital rate propagation and evaluated their impact on population growth rate estimates. C_LIO_LIAlthough around 78% of MPM papers report some kind of uncertainty in their findings, only half of those report uncertainty in all aspects. Additionally, only 31% of papers fully propagate uncertainty through to derived quantities. Our simulations demonstrate that, even under a median uncertainty level, incomplete propagation introduces bias. Omitting uncertainty may substantially alter conclusions, particularly for results showing small changes in population size. Biased conclusions were most common when uncertainty in the most influential vital rates for population growth were omitted. C_LIO_LIWe suggest comprehensive guidelines for reporting and propagating uncertainty in MPMs. Standardising methods and reporting will increase the reliability of MPMs and enhance the comparability of different models. These guidelines will improve the accuracy, transparency, and reliability of population projections, increasing our confidence in results that can inform conservation efforts, ultimately contributing to biodiversity preservation. C_LI

ecology↗

Experimental manipulation of nocturnal nest cavity temperature in wild blue tits

Advances in the timing of reproduction in temperate species are some of the most well documented biotic responses to increasing global temperatures. However, the magnitude and rate of these advances in timing are not equal across all taxonomic groups. These differences can lead to disruption of interspecific relationships if species respond differently to temperature changes. Understanding the relationship between temperature and phenology is a key step in predicting future population trends for species living in seasonal environments. However, experimentally manipulating temperature in the wild is logistically challenging and has consequently rarely been attempted. In this study we experimentally test whether in-nest temperatures in early spring act as a cue for breeding phenology in a population of wild blue tits (Cyanistes caeruleus). We split nests into three treatments; heated, cooled, and control. In-nest temperature in the heated and cooled boxes was manipulated by an average of {+/-} 0.6 {degrees}C from control temperatures using heating devices and ice packs respectively. We assessed the impact of our experimental manipulation on box occupancy and reproductive timing. We found trends towards earlier phenology in heated nest boxes in addition to a higher occupancy rate in cooled boxes, however neither of these trends was found to be statistically significant. Our ability to distinguish statistical signals was hampered by unexpectedly low occupancy rates across all experimental treatments. Based on the results we cannot say if nocturnal in-nest temperature is an important cue for nest box choice or the timing of laying.

ecology↗