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Shipley, B.

Publications and source records attributed to Shipley, B..

3 recordsLinked to original sources

Global slowdown in the rate of invasive alien species establishment

The number of species introduced outside of their historical ranges by human activity continues to rise. A subset of these species establishes, form self-sustaining populations, and some (invasive alien species) go on to cause substantial harm to biodiversity and ecosystems. Preventing new invasive alien species from establishing is the key focus of interventions, because post-establishment management is costly and often fails. However, it remains unclear how effective multilateral efforts have been in curbing the rise. Here we show that the emergence of new invasive alien species across countries is slowing, and trends are similarly negative across geographically diverse countries. Using data and modelling advances, we find a 35% reduction in the establishment of new invasive alien species over a policy-relevant 50-year time frame. The findings directly inform the assessment of progress for the invasive alien species target of the Kunming-Montreal Global Biodiversity Framework, and provide a global baseline for monitoring rates of invasive alien species establishment. Furthermore, the slowdown suggests that policy and investment over recent decades to prevent invasive alien species from entering and establishing in countries have had a positive effect.

ecology↗

Motion Blur Microscopy

Imaging and characterizing the dynamics of cellular adhesion in blood samples is of fundamental importance in understanding biological function. In vitro microscopy methods are widely used for this task, but typically require diluting the blood with a buffer to allow for transmission of light. However whole blood provides crucial mechanical and chemical signaling cues that influence adhesion dynamics, which means that conventional approaches lack the full physiological complexity of living microvasculature. We propose to overcome this challenge by a new in vitro imaging method which we call motion blur microscopy (MBM). By decreasing the source light intensity and increasing the integration time during imaging, flowing cells are blurred, allowing us to identify adhered cells. Combined with an automated analysis using machine learning, we can for the first time reliably image cell interactions in microfluidic channels during whole blood flow. MBM provides a low cost, easy to implement alternative to intravital microscopy, the in vivo approach for studying how the whole blood environment shapes adhesion dynamics. We demonstrate the methods reproducibility and accuracy in two example systems where understanding cell interactions, adhesion, and motility is crucial--sickle red blood cells adhering to laminin, and CAR-T cells adhering to E-selectin. We illustrate the wide range of data types that can be extracted from this approach, including distributions of cell size and eccentricity, adhesion durations, trajectories and velocities of adhered cells moving on a functionalized surface, as well as correlations among these different features at the single cell level. In all cases MBM allows for rapid collection and processing of large data sets, ranging from thousands to hundreds of thousands of individual adhesion events. The method is generalizable to study adhesion mechanisms in a variety of diseases, including cancer, blood disorders, thrombosis, inflammatory and autoimmune diseases, as well as providing rich datasets for theoretical modeling of adhesion dynamics.

biophysics↗