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Biology subjects

Sheeba, V.

Publications and source records attributed to Sheeba, V..

10 recordsLinked to original sources

Density-dependent plasticity of female reproductive output mediates Allee effects in Drosophila melanogaster

Allee effects are positive relationships between components of individual fitness and the number or density of individuals in a population. Negative density effects are well documented in Drosophila melanogaster across life stages, while Allee effects are rare and largely confined to the larval stages. However, despite the costs of high density, adult flies are found to exhibit attraction to same-sex conspecifics, suggesting some fitness value to the presence of conspecifics. We measured fitness related traits of singly mated-females housed at same-sex densities of 1, 2, or 10 and found clear reductions in lifetime reproductive output at low densities. Additionally, these females concentrated reproductive effort within early adulthood, albeit without improving estimates of fitness. When housed at variable densities, females altered their reproductive output in response to immediate densities, but were unable to improve it unless remating was possible, indicating an interaction between mating and density. Overall, our findings suggest that reproductive plasticity in response to the presence of conspecifics mediates positive effects of density on fitness in female Drosophila melanogaster. Understanding the physiological and ecological bases of such plasticity may help explain the evolution of social tendency in the fly.

evolutionary biology↗

Complex environmental cycles reveal evolution of circadian activity waveform and thermosensitive timeless splicing

Circadian clocks synchronise physiological and behavioural rhythms to environmental cycles such as light and temperature. In nature, temperature cycles lag light cycles, with the extent of lag varying seasonally. Thus, the extent of this delay is an essential aspect of seasonal cues. Yet, the combined effects of light and temperature cycles on circadian systems remain poorly understood. Using a series of environmental cycles with varying degrees of lag between temperature and light, we examined the response of circadian activity to complex environments and show that morning and evening activity exhibit differential temperature sensitivity in Drosophila melanogaster. We find that the expression of temperature-induced timeless splice variants is modulated by light cycles as well as the degree of lag between temperature and light. We also reveal rhythmic expression of the timeless splicing regulator Psi. Furthermore, we leveraged a laboratory-selection approach to reveal that the differential temperature sensitivity of morning and evening activity evolves upon selection. We observed selection-dependent differences in temporal expression of timeless splice variants thus linking circadian gene splicing to behavioural plasticity. Thus, our integrated behavioural, molecular, and evolutionary approach advances the understanding of how circadian systems integrate seasonal cues.

neuroscience↗

Reorganisation of circadian activity and the pacemaker circuit under novel light regimes

Many environmental features are cyclic, with predictable daily and yearly changes which vary across latitudes. Organisms cope with such change using internal timekeepers or circadian clocks which have evolved remarkable flexibility. This flexibility is evident in the waveforms of behavioural and underlying molecular rhythms. In todays world, many ecosystems experience artificial light at night, leading to unusual photoperiodic conditions. Additionally, occupational demands expose many humans to unconventional light cycles. Yet, practical means of manipulating activity waveforms for beneficial purposes are lacking. This requires an understanding of principles and factors governing waveform plasticity of activity rhythms. Even though waveform plasticity remains underexplored, few recent studies have used novel light regimes, inspired by shift work schedules, with alternating bright light and dim light (LDimLDim) to manipulate the activity waveform of nocturnal rodents. We undertook this study to understand what aspects of light regimes contribute to waveform flexibility and how the underlying neuronal circuitry regulates the behaviour by subjecting Drosophila melanogaster to novel light regimes. Using a range of LDimLDim regimes, we found that dim scotopic illumination of specific durations induces activity bifurcation in fruit flies, similar to mammals. Thus, we suggest evolutionarily conserved effects of features of the light regime on waveform plasticity. Further, we demonstrate that the circadian photoreceptor CRYPTOCHROME is necessary for activity bifurcation. We also find evidence for circadian reorganisation of the pacemaker circuit wherein the evening neurons regulate the timing of both bouts of activity under novel light regimes. Thus, such light regimes can be explored further to understand the dynamics and coupling within the circadian circuit. The conserved effects of specific features of the light regime open up the possibility of designing other regimes to test their physiological impact and leverage them for waveform manipulation to minimise the ill effects of unusual light regimes. Author SummaryIt is thought that the appropriate timing of physiological and behavioural rhythms of organisms with respect to the environmental cycle confers an adaptive advantage. Endogenous timekeepers or circadian clocks regulate such rhythms. To optimally time biological rhythms, its waveform must be plastic and respond to changes in external cycles. Changes in external cycles may be natural, as seen across latitudes or seasons, or anthropogenic, such as artificial light induced changes in photoperiod or shiftwork driven novel light/dark cycles. Previous studies using a nocturnal rodent model showed that novel light regimes (LDimLDim) caused locomotor activity to bifurcate such that mice showed two bouts of activity restricted to the dimly lit phases. Here, we first demonstrate that conserved features of the light regime - dim scotopic illumination of specific light durations induce activity bifurcation in the fly model. We leverage the genetic toolkit of the Drosophila model to also show evidence for the reorganisation of the circadian pacemaker neuronal network upon exposure to novel light regimes. Our findings indicate that conserved effects of specific features of the environmental regimes can be exploited to design light regimes that ease the waveform into synchronising with challenging conditions such as during shift work, jetlag, and photoperiodic changes.

neuroscience↗

Supramolecular catch-and-release strategy for bioorthogonal fluorogenic imaging across the visible spectrum

Fluorogenic probes that unmask fluorescence signals in response to a bioorthogonal reaction are a powerful new addition to biological imaging. They can provide significantly reduced background fluorescence and minimize non-specific signals, potentially allowing real-time high-contrast imaging without washing out excess fluorophores. While diverse classes of highly refined synthetic fluorophores are readily available now, their integration into a bioorthogonal fluorogenic scheme still necessitates another level of extensive design efforts and customized structural alterations to optimize quenching mechanisms for each given fluorophore scaffold. Herein, we present an easy-to-implement and highly generalizable supramolecular catch-and-release strategy for generating an efficient bioorthogonal fluorogenic response from essentially any readily available fluorophores without further structural alterations. We designed this distinct strategy based on the macrocyclic cucurbit[7]uril (CB7) host, where a fluorogenic response is achieved by programming a guest displacement reaction from the macrocycle cavity. We used this strategy to rapidly generate fluorogenic probes across the visible spectrum from structurally diverse classes of fluorophore scaffolds, including coumarin, bodipy, rhodamine, and cyanine. These probes were applied to no-wash fluorogenic imaging of various target molecules in live cells and tissue with minimal background and no appreciable non-specific signal. Notably, the orthogonal reactivity profile of the system allowed us to pair this host-guest fluorogenic probe with the covalently clickable fluorogenic probe to achieve high-contrast super-resolution and multiplexed fluorogenic imaging in cells and tissue.

bioengineering↗

HSP40 overexpression in pacemaker neurons protects against circadian dysfunction in a Drosophila model of Huntington's Disease

Circadian disturbances are early features of neurodegenerative diseases, including Huntingtons Disease (HD), affecting the quality of life of patients and caregivers. Emerging evidence suggests that circadian decline feeds-forward to neurodegenerative symptoms, exacerbating them, highlighting a need for restoring circadian health. Therefore, we asked whether any of the known neurotoxic modifiers can suppress circadian dysfunction. We performed a screen of neurotoxicity-modifier genes to suppress circadian behavioural arrhythmicity in a Drosophila circadian HD model. Notably, the molecular chaperones HSP40 and HSP70 (Heat Shock Protein) emerged as significant suppressors in the circadian context, with HSP40 being the more potent mitigator of HD-induced deficits. Upon HSP40 overexpression in the Drosophila circadian ventrolateral neurons (LNv), the behavioural rhythm rescue was associated with neuronal rescue of loss in circadian proteins from small LNv soma. Specifically, there was a restoration of the molecular clock protein Period and its oscillations in young flies and a long-lasting rescue of the output neuropeptide Pigment Dispersing Factor. Significantly, there was a reduction in the expanded Huntingtin inclusion load, concomitant with the appearance of a spot-like Huntingtin form. Thus, we provide evidence for the first time that implicates the neuroprotective chaperone HSP40 in circadian rehabilitation. Given the importance of proteostasis and circadian health in neurodegenerative diseases, the involvement of molecular chaperones in circadian maintenance has broader therapeutic implications. Summary StatementThis study shows, for the first time, a neuroprotective role of chaperone HSP40 in overcoming circadian dysfunction associated with Huntingtons Disease in a Drosophila model

neuroscience↗

Effects of food availability cycles on phase and period of activity/rest rhythm in Drosophila melanogaster

Foraging and feeding are indispensable for survival and their timing depends not only on the metabolic state of the animal but also on the availability of food resources in their environment. Since both these aspects are subject to change over time, these behaviours exhibit rhythmicity in occurrence. As the locomotor activity of an organism is related to its disposition to acquire food, and peak feeding in fruit flies has been shown to occur at a particular time of the day, we asked if cyclic food availability can entrain their rhythmic activity. By subjecting flies to cyclic food availability i.e., feeding/starvation (FS) cycles, we provided food cues contrasting to the preferred activity times and observed if this imposed cycling in food availability could entrain the activity/rest rhythm. We found that phase control, which is a property integral to entrainment, was not achieved despite increasing starvation duration of FS cycles (FS12:12, FS10:14 and FS8:16). We also found that flies subjected to T21 and T26 FS cycles were unable to match period of the activity rhythm to short or long T-cycles. Taken together these results show that external food availability cycles do not entrain the activity/rest rhythm of fruit flies. However, we find that starvation induced hyperactivity causes masking which results in phase changes. Additionally, T-cycle experiments resulted in minor period changes during FS treatment. These findings highlight that food cyclicity by itself may not be a potent zeitgeber but may act in unison with other abiotic factors like light and temperature to help flies time their activity appropriately.

animal behavior and cognition↗

Evidence for co-evolution of masking and circadian phase in Drosophila melanogaster

Heritable variation in the timing or circadian phases of rhythmic events with respect to daily time cues gives rise to chronotypes. Despite its importance, the mechanisms (clock or non-clock) regulating chronotypes remain elusive. Using artificial laboratory selection for divergent phasing of emergence of adults from pupae, our group has derived populations of Drosophila melanogaster which are early and late chronotypes for eclosion rhythm. Several circadian rhythm characteristics of these populations have since been described. We hypothesized that our selection protocol has inadvertently resulted in selection for masking, a non-clock phenomenon, in the early chronotype due to the placement of our selection window (which includes the lights-ON transition). Based on theoretical predictions and previous studies on our populations, we designed experiments to discriminate between enhanced masking to light versus circadian clock mediated changes in determining enhanced emergence in the morning window in our early chronotypes. Using a series of phase-shift protocols, LD-DD transition, and T-cycle experiments, we find that our early chronotypes have evolved positive masking, and their apparent entrained phases are largely contributed by masking. Through skeleton T-cycle experiments, we find that in addition to the evolution of greater masking, our early chronotypes have also evolved advanced phase of entrainment. Furthermore, our study systematically outlines experimental approaches to examine relative contributions of clock versus non-clock control of an entrained behavior. Although it has previously been suggested that masking may confer an adaptive advantage to organisms, here we provide experimental evidence for the evolution of masking as a mean of phasing of an entrained rhythm that can complement clock control of an entrained behavior.

animal behavior and cognition↗

Gap junction protein INNEXIN2 modulates the period of free-running rhythms in Drosophila melanogaster

The circadian neuronal circuit of Drosophila melanogaster is made up of about 150 neurons, distributed bilaterally and distinguished into 7 clusters. Multiple lines of evidence suggest that coherent rhythms in behaviour are brought about when these clusters function as a network. Although chemical modes of communication amongst circadian neurons have been well-studied, there has been no report of communication via electrical synapses made up of gap junctions. Here, we report for the first time that gap junction proteins - Innexins play crucial roles in determining the period of free-running activity rhythms in flies. Our experiments reveal the presence of gap junction protein INNEXIN2 in the ventral lateral neurons. RNA-interference based knockdown of its expression in circadian pacemakers slows down the speed of locomotor activity rhythm. Concomitantly, we find alterations in the oscillation of a core-clock protein PERIOD and in the output molecule Pigment Dispersing Factor in the circadian pacemaker neuron network.

neuroscience↗

Mechanosensory stimulation via Nanchung expressing neurons can induce daytime sleep in Drosophila

The neurogenetic bases of sleep, a phenomenon considered crucial for well-being of organisms has recently been under investigation using the model organism Drosophila melanogaster. Although sleep is a state where sensory threshold for arousal is enhanced, it is known that certain kinds of repetitive sensory stimuli such as rocking, can in fact promote sleep in humans. Here we report that orbital motion aided mechanosensory stimulation promotes sleep in Drosophila, independent of the circadian clock, but controlled by the homeostatic system. Mechanosensory receptor nanchung (Nan) expressing neurons in the chordotonal organs mediate this sleep induction - flies where these neurons are either silenced or ablated display significantly reduced sleep induction upon mechanosensory stimulation. Transient activation of the Nan-expressing neurons also enhances sleep levels confirming the role of these neurons in sleep induction. Thus, we show for the first time that mechanosensory stimulation promotes sleep even in flies D. melanogaster and that it is mediated by proprioceptors.

neuroscience↗

Sleep deprivation negatively impacts reproductive output in Drosophila melanogaster

Most animals sleep or exhibit a sleep-like state, yet the adaptive significance of this phenomenon remains unclear. Although reproductive deficits are associated with lifestyle induced sleep deficiencies, how sleep loss affects reproductive physiology is poorly understood, even in model organisms. We aimed to bridge this mechanistic gap by impairing sleep in female fruit flies and testing its effect on egg output. We find that sleep deprivation by feeding caffeine or by mechanical perturbation results in decreased egg output. Transient activation of wake-promoting dopaminergic neurons decreases egg output in addition to sleep levels, thus demonstrating a direct negative impact of sleep deficit on reproductive output. Similarly, loss-of-function mutation in dopamine transporter fumin (fmn)leads to both significant sleep loss and lowered fecundity. This demonstration of a direct relationship between sleep and reproductive fitness indicates a strong driving force for the evolution of sleep.

neuroscience↗