Search bioRxiv⌕ Search

Biology subjects

Sharp, W.

Publications and source records attributed to Sharp, W..

2 recordsLinked to original sources

Piezo2 tension sensitivity and its modulation by alternative splicing

Piezo2 is a force-gated ion channel that functions as a sensor of mechanical touch, proprioception, lung inflation, and gut transit. Human Piezo2 contains seven domains that are alternatively spliced in a tissue-specific fashion resulting in the expression of at least 22 distinct variants. Despite the relevance of Piezo2 in human physiology, its sensitivity to membrane tension, and how this fundamental biophysical property is affected by alternative splicing, are unknown. Here, we use cell-attached pressure-clamp electrophysiology combined with differential interference contrast microscopy to quantify the response of Piezo2 to membrane tension and identify the alternatively spliced exon 35 as a domain sufficient to confer high sensitivity to membrane tension and cellular indentation. We further show that physiological variants of Piezo2 sense mechanical forces with distinct sensitivities and dynamic ranges. Together, our findings rationalize how Piezo2 variants may fulfill distinct physiological functions required for somatosensation and interoception.

biophysics↗

Predicting Molecular Docking Affinity of Per- and Polyfluoroalkyl Substances (PFAs) Towards Human Blood Proteins Using Generative AI Algorithm DiffDock

This study computationally evaluates the molecular docking affinity of various perfluoroalkyl and polyfluoroalkyl substances (PFAs) using a generative machine learning algorithm, DiffDock, specialized in protein-ligand blind-docking learning and prediction. Concerns about the chemical pathways and accumulation of PFAs in the environment and eventually in human body has been rising due to empirical findings that levels of PFAs in human blood has been rising. Though there is currently a heightened need to understand the pathways of PFAs, empirical studies on PFAs have been relatively slow due to the time-scale and cost of standard chemical analysis such as those in blood samples. The current study demonstrates the implementation of DiffDock and assesses the prediction results in relation to empirical findings. The capability of an advanced generative artificial intelligence (AI) algorithm designed for protein-ligand docking such as DiffDock offers a fast approach in determining the potential molecular pathways of PFAs in human body.

bioinformatics↗