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Shaban, B.

Publications and source records attributed to Shaban, B..

2 recordsLinked to original sources

MKPV (aka MuCPV) and related chapparvoviruses are nephro-tropic and encode novel accessory proteins p15 and NS2

Mouse kidney parvovirus (MKPV) is a member of the provisional Chapparvovirus genus that causes renal disease in immune-compromised mice, with a disease course reminiscent of polyomavirus-associated nephropathy in immune-suppressed kidney transplant patients. Here we map four MKPV transcripts, created by alternative splicing, to a common transcription initiation region, and use mass spectrometry to identify \"p10\" and \"p15\" as novel chapparvovirus accessory proteins produced in MKPV-infected kidneys. p15 and a splicing-dependent putative accessory protein NS2 are conserved in all near-complete tetrapod chapparvovirus genomes currently available (from mammals, birds and a reptile). In contrast, p10 may be encoded only by viruses with >60% amino acid identity to MKPV. We show that MKPV is kidney-tropic and that the bat chapparvovirus DrPV-1 and a non-human primate chapparvovirus, CKPV, are also found in the kidneys of their hosts. We propose, therefore, that chapparvoviruses with >60% VP1 amino acid identity to MKPV be classified into a genus dubbed Nephroparvovirus, which is consistent with nomenclature for the genus Erythroparvovirus.

microbiology

Phylogeographic parallelism: concordance of patterns in closely related species illuminates underlying mechanisms in the historically glaciated Tasmanian landscape

Phylogeography provides a means to understand mechanisms that shaped the distribution and abundance of species, including the role of past climate change. While concordant phylogeographic relationships across diverse taxa suggest shared underlying mechanisms ("phylogeographic parallelism"), it is also possible that similar patterns are the product of different mechanisms ("phylogeographic convergence"), reflecting variation among taxa in factors such as environmental tolerances, life histories, and vagility. Hence, phylogeographic concordance among closely related and ecologically similar species can yield a more confident understanding of the past mechanisms which shaped their distribution and abundance. This study documented mitochondrial and nuclear phylogeographic patterns in the ectotherm skink, Niveoscincus metallicus, which occupies historically glaciated regions of Tasmania, and contrasted these with the closely related and broadly sympatric N. ocellatus. Major phylogeographic breaks were similar in location between the two species, and indicative of isolation caused by retreat from high elevation areas during glaciations, but with long-term persistence at multiple low elevation sites. Hence, Pleistocene glacial refugia were altitudinal rather than latitudinal, a pattern mirrored in other temperate Southern Hemisphere taxa. This study also examined phylogeographic patterns across the intermittently inundated Bassian Isthmus between mainland Australia and the island of Tasmania, and revealed that structuring is similarly maintained when populations were physically isolated during interglacial rather than glacial stages.

evolutionary biology