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Biology subjects

Seamon, B. A.

Publications and source records attributed to Seamon, B. A..

2 recordsLinked to original sources

Improved Stability and Interpretability of Motor Modules Computed with an Autoencoder

Motor module analysis is an important tool in the study of movement, particularly in people with impaired neural control. The most common method for computing motor modules is non-negative matrix factorization (NMF), which identifies a matrix of motor modules and their corresponding time-series activity from electromyography data. NMF has several limitations, including dependence of the muscle weightings on the number of modules selected. Approaches for selecting the number of modules vary between studies, making it difficult to compare and reproduce results. Some metrics of motor control complexity use the variance accounted for when extracting a single motor module (VAF1), yet that modules structure offers little biomechanical interpretability. In this work, we present a method for computing motor modules using an autoencoder, a neural network architecture that can find latent representations of data. Using a single layer autoencoder, we extracted motor modules from data in able-bodied and individuals post-stroke. The structure of autoencoder-computed modules were significantly less sensitive to selected module number. With the autoencoder-computed modules, increasing the number of modules added new information, instead of splitting previous modules. Autoencoder-computed modules, especially at low module counts, had more distinct and interpretable biomechanical functions. Lastly, the autoencoder-computed modules are consistent with previous NMF studies in persons with stroke, which found fewer modules needed to explain the muscle activity of paretic limbs. Our autoencoder-based method offers a new approach for computing motor modules, with advantages of better stability in module structure across module counts, and a more biomechanically relevant interpretation of VAF1. NEW & NOTEWORTHYThis work presents an approach for computing motor modules using an autoencoder and comprehensively compares the in stability of motor module structure, functional significance at low module counts, and interpretation of VAF1 to the current state of the art. The AE-computed module structures were more stable at different module counts. The AE has the potential to improve confidence in module structure and make analysis less dependent on the specific number of modules selected.

physiology↗

A novel biomechanical indicator for impaired ankle dorsiflexion function during walking in individuals with chronic stroke

Ankle dorsiflexion function during swing phase of the gait cycle contributes to foot clearance and plays an important role in walking ability post-stroke. Commonly used biomechanical measures such as foot clearance and ankle joint excursion have limited ability to accurately evaluate dorsiflexor function in stroke gait. We retrospectively evaluated ankle angular velocity and ankle angular acceleration as direct measures for swing phase dorsiflexor function in post-stroke gait of 61 chronic stroke survivors. Our linear regression models revealed that peak ankle angular velocity (AAVP), peak ankle angular acceleration (AAAP), peak dorsiflexion angle (DFAP) and peak foot clearance (FCLP) during swing had a significant relationship (p < 0.05) with impaired dorsiflexion function. AAAP and DFAP accounted for the most variance of dorsiflexion function. Additionally, AAVP, AAAP, FCLP during swing, correlated significantly with all clinical outcome measures of walking ability. DFAP during swing had a positive correlation only with FMA-LE. Post-hoc Williams t-tests, used to compare the magnitude of difference between two non-independent correlations, revealed that the correlation between all clinical measures and DFAP were significantly weaker than with AAVP and AAAP. We also found that correlation between FMA-LE and FCLP was weaker than with AAVP and AAAP. We found an excellent test-retest reliability for both AAVP (ICC = 0.968) and AAAP (ICC = 0.947). These results suggest that DFAP may only be associated with non-task specific isolated dorsiflexion movement, but not during walking. FCLP is associated with dorsiflexion function and walking ability measures but not as strongly as AAVP and AAAP possibly because FCLP is influenced by contribution from hip and knee joint movements during walking. Therefore, we believe that AAVP and AAAP both can be used as reliable measures of impaired dorsiflexion function in post-stroke gait.

bioengineering↗