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Biology subjects

Scott, K. F.

Publications and source records attributed to Scott, K. F..

2 recordsLinked to original sources

Native catalase expression in Arabidopsis thaliana is more than sufficient to limit excess decarboxylation from photorespiratory intermediates

The hydrogen peroxide (H2O2) scavenging enzyme, catalase, plays a critical role in the photorespiratory pathway by maintaining the balance of H2O2, a reactive oxygen species (ROS), in the peroxisome. H2O2 acts as both a signaling molecule and a potential source of ROS depending on its accumulation in the peroxisome. Additionally, H2O2 can also drive non-enzymatic decarboxylation (NED) reactions as well as other decarboxylation reactions, leading to increased CO2 release that is linked to a severe growth phenotype. However, the exact cause of this stunted growth phenotype is not fully understood, and it remains unclear whether the capacity of catalase is critical for minimizing these decarboxylating reactions. Here we elucidate the mechanism behind the decrease in plant growth due to the accumulation of H2O2 from photorespiration using cat2 knock-out lines of Arabidopsis thaliana rescued with transgenic expression lines of Heliobacter pylori catalase. These experiments demonstrated that while one of the three heterologous lines expressing H. pylori catalase isoform (Hp615) had greater catalase activity than cat2-KO and rescued the severe growth and photosynthetic phenotype, its catalase activity was still far below wild type levels. These findings suggest that catalase plays a crucial role in maintaining H2O2 homeostasis within the peroxisome and minimizing decarboxylation reactions, both of which are linked to plant growth. Moreover, once a threshold capacity is reached, increasing catalase capacity further may offer limited benefits in enhancing net carbon fixation. HighlightWe show that peroxisomal catalase is important for maintaining high rates of net carbon fixation associated with plant growth. Native catalase levels in Arabidopsis thaliana are in excess of that which is required to minimize alternative decarboxylation reactions. Therefore, efforts to optimize catalase-mediated degradation of H2O2 may be of limited benefit.

plant biology↗

An RNAi screen of Rab GTPase genes in C. elegans reveals that somatic cells of the reproductive system depend on rab-1 for morphogenesis but not stem cell niche maintenance

Membrane trafficking is a crucial function of all cells and is regulated at multiple levels from vesicle formation, packaging, and localization to fusion, exocytosis, and endocytosis. Rab GTPase proteins are core regulators of eukaryotic membrane trafficking, but developmental roles of specific Rab GTPases are less well characterized, potentially because of their essentiality for basic cellular function. C. elegans gonad development entails the coordination of cell growth, proliferation, and migration--processes in which membrane trafficking is known to be required. Here we take an organ-focused approach to Rab GTPase function in vivo to assess the roles of Rab genes in reproductive system development. We performed a whole-body RNAi screen of the entire Rab family in C. elegans to uncover Rabs essential for gonad development. Notable gonad defects resulted from RNAi knockdown of rab-1, the key regulator of ER-Golgi trafficking. We then examined the effects of tissue-specific RNAi knockdown of rab-1 in somatic reproductive system and germline cells. We interrogated the dual functions of the distal tip cell (DTC) as both a leader cell of gonad organogenesis and the germline stem cell niche. We find that rab-1 functions cell-autonomously and non-cell-autonomously to regulate both somatic gonad and germline development. Gonad migration, elongation, and gamete differentiation--but surprisingly not germline stem niche function--are highly sensitive to rab-1 RNAi. SUMMARYThe Rab family of GTPases regulate vesicular trafficking in cells. This study assessed the consequences for the growth of the gonad of RNAi-mediated gene knockdown of all Rab GTPase genes in C. elegans. The highly conserved primary regulator of ER-Golgi trafficking, rab-1, is essential for normal gonad and germline development. Further experiments found that rab-1 is required in the somatic gonad for gonad elongation and migration, germline proliferation, and proper gamete formation. Surprisingly, the ability of the germline stem cell niche to maintain germ cells in the proliferative stem-like state was not affected by rab-1 RNAi knockdown.

developmental biology↗