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Schouten, S.

Publications and source records attributed to Schouten, S..

2 recordsLinked to original sources

Practical considerations for improved reliability and precision during compound specific analysis of δ15N in amino acids using a single combined oxidation-reduction reactor.

RATIONALEThere has been increased interest in the analysis for {delta}15N in amino acids to gain simultaneous insight into both trophic relationships and source producers within ecosystems. New developments in gas chromatography combustion isotope ratio mass spectrometry equipment has led to variable outcomes in performance due to limited information about best practices for new systems.\n\nMETHODSPrecision for {delta}15N in amino acids using the single combined oxidation-reduction reactor is improved across a sequence of analyses if the reactor is oxidized for a substantial period (2 h), immediately followed with a conditioning run of alkanes prior to analysis for N, and the liquid N2 CO2 trap is left immersed throughout. A five point calibration curve using amino acids with a range of {delta}15N values from -2.4{per thousand} to +61.5{per thousand} was used in combination with a 13 amino acid mixture to correct for offsets during derivatization.\n\nRESULTSCombining the improved setup with normalization techniques using both internal and external standards allows for a reliable throughput of ~25 samples per week. It allowed for a reproducible level of error of <{+/-}0.5{per thousand} within standards repeated 10 times across each sequence and a sample error of ({+/-}0.18{per thousand}), which is lower than analytical error typically associated with {delta}15N-amino acid analysis ({+/-}1{per thousand}).\n\nCONCLUSIONSA few practical considerations regarding oxidation and conditioning of the combustion reactor allow for increased sequence capacity with the single combined oxidation-reduction reactor. These considerations combined with normalization techniques result in a higher throughput and reduced analytical error during analysis of {delta}15N in amino acids.

ecology

ANME-2d anaerobic methanotrophic archaea differ from other ANME archaea in lipid composition and carbon source

The anaerobic oxidation of methane (AOM) is a microbial process present in marine and freshwater environments. AOM is important for reducing the emission of the second most important greenhouse gas methane. In marine environments anaerobic methanotrophic archaea (ANME) are involved in sulfate-reducing AOM. In contrast, Ca. Methanoperedens of the ANME-2d cluster carries out nitrate AOM in freshwater ecosystems. Despite the importance of those organisms for AOM in non-marine environments not much is known about their lipid composition or carbon sources. To close this gap, we analyzed the lipid composition of ANME-2d archaea and found that they mainly synthesize archaeol and hydroxyarchaeol as well as different (hydroxy-) glycerol dialkyl glycerol tetraethers, albeit in much lower amounts. Abundant lipid headgroups were dihexose, monomethyl-phosphatidyl ethanolamine and phosphatidyl hexose. Moreover, a monopentose was detected as a lipid headgroup which is rare among microorganisms. Batch incubations with 13C labelled bicarbonate and methane showed that methane is the main carbon source of ANME-2d archaea varying from ANME-1 archaea which primarily assimilate dissolved inorganic carbon (DIC). ANME-2d archaea also assimilate DIC, but to a lower extent than methane. The lipid characterization and analysis of the carbon source of Ca. Methanoperedens facilitates distinction between ANME-2d and other ANMEs.

microbiology