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Biology subjects

Schober, M.

Publications and source records attributed to Schober, M..

3 recordsLinked to original sources

Speeded Inference Game: Opening a new chapter in the assessment of error awareness

Influential theories on error processing assume that when we conduct errors adaptive processes are triggered to improve our behaviour and prevent errors in the future. These processes appear to be more effective after participants have detected an error. Therefore, the assessment of error awareness allowing a differential analysis of detected and undetected errors in the context of cognitive control and behavioural adjustments has gained more and more attention in the past decades. A common methodological challenge posed on all studies investigating error detection is that the number of undetected errors is usually relatively low. Here, we introduce a gamified experimental task that uses an adaptive algorithm to generate a robust and stable amount of errors with a high rate of undetected errors. Further, we were able to identify error types, which interestingly differed in terms of their detection rate. Moreover, the game-like appearance of the novel experimental task led to highly motivated participants. The results of the first study were replicated and extended by a second behavioural study. Notably, in study 2, a change in task design specifically modulated error detection, while these changes did not affect the total error rate. Potential applications of the open-source code will be discussed. With this newly developed paradigm, we wish to lay the ground for future research to understand better (neural) processes associated with error awareness.

neuroscience↗

SOX2-phosphorylation toggles a bistable differentiation-switch in squamous cell carcinoma

The fate choice between stem cell self-renewal and differentiation is regulated by bistable transcriptional networks, which are balanced in homeostasis and imbalanced in tumors. Yet, how stem cells switch from self-renewal to differentiation remains a conundrum. Here, we discover a molecular mechanism that allows stem cell-like tumor propagating cells (TPCs) in squamous cell carcinomas (SCCs) to switch from a mutually exclusive SOX2-PITX1-TP63 self-renewal circuit to a KLF4 driven differentiation program, dependent on the relative occupancy of a novel Klf4-regulatory enhancer cluster (Klf4EC944) by SOX2 or KLF4, respectively. We find SOX2 occupies this site in TPCs to inhibit Klf4 transcription, but upon phosphorylation SOX2 becomes evicted from Klf4EC944, allowing residual KLF4 to occupy this site instead, boost the expression of KLF4 and its downstream targets, and differentiate self-renewing TPCs into post-mitotic SCC cells. This mechanism allows SOX2 to promote self-renewal and tumor formation, while preserving the differentiation potential in SCC cells. Our data suggest that stochastic cell fate decisions depend on the effective concentration of enzymatically regulated transcription factors. The surprising specificity by which SOX2-phosphorylation governs the bistable Klf4EC944 network-switch in SCCs reveals a conceptual framework for the identification of similar switches in other stem cell and cancer types and their potential development into cell type specific differentiation therapies for diseases in which tissue homeostasis has gone awry.

cancer biology↗

Evaluating 87Sr/86Sr isotope ratios and Sr mass fractions in otoliths of different European freshwater fish species as fishery management tool in an Alpine foreland with limited geological variability

The focus of this study was to assess the potential of otolith microchemistry as a fishery management tool for different European freshwater fish species in an Alpine foreland with a diverse range of different water bodies but low geological variation. 87Sr/86Sr isotope and Sr/Ca ratios in water samples from 26 habitat sites in a pre-alpine catchment region around lake Chiemsee, Germany, an important region for recreational and economic fisheries, were analysed. 87Sr/86Sr isotope ratios and the Sr mass fractions in otoliths of 246 fish out of 16 species were determined using (laser ablation) inductively coupled plasma mass spectrometry ((LA)-ICP-MS). Habitats could be discriminated into three distinct strontium isotope regions (SIGs) and seven clusters with characteristic 87Sr/86Sr isotope and Sr/Ca ratios. The direct comparison of 87Sr/86Sr isotope ratios in water and otolith samples allowed to identify fish that might have been a) migrating b) transferred from other water bodies or c) stocked from fish farms. Sr/Ca ratios in water and the Sr mass fraction in otoliths were highly correlated, although significant differences between species from the same environment could be documented. Sr mass fractions in sagittae of Perca fluviatilis were about 60 % of those in sagittae of Coregonus spp and of lapilli of roach Rutilus rutilus from the same habitats. Different partition factors for water to otolith Sr/Ca mass fractions were determined for different species. Discrimination of fish otoliths by 87Sr/86Sr isotope ratios and Sr mass fractions according to habitat clusters was possible with success rates ranging from 92 % to 100 % for cyprinids, European perch Perca fluviatilis, whitefish Coregonus spp. and European grayling Thymallus thymallus, and was 74 % for salmonids. Otolith microchemistry proved to have great potential to serve as a fishery management tool at smaller spatial scales such as in the studied Alpine foreland when considering the limited variation of 87Sr/86Sr isotope and Sr/Ca ratios, the type and spatial distribution of habitats, and the species and question under investigation. HighlightsO_LIOtolith microchemistry applied in in area with limited geological variability C_LIO_LIFish transferred, stocked or migrated were identified C_LIO_LIRegressions between Sr/Ca ratios in water predict Sr mass fractions in otoliths C_LIO_LISpecies specific Sr discrimination from water into otoliths C_LIO_LIEuropean freshwater fish species assigned to habitat clusters of origin C_LI

ecology↗