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Schneider, D.

Publications and source records attributed to Schneider, D..

At least 37 records · Page 2Linked to original sources

EEG Correlates of Cognitive Dynamics in Task Resumption after Interruptions: The Impact of Available Time and Flexibility

Interruptions are a common aspect of everyday working life, negatively affecting both task performance and long-term psychological well-being. However, research suggests that the effects of interruptions can be mitigated in several ways, such as the opportunity to anticipate the interruptions and preparation time. Here, we used a retrospective visual working memory task to investigate the effects of duration and flexible resumption after interruptions, with 28 participants (18-30 years old) attending the experiment. For this main task participants were required to remember the orientations of a set of colored bars and retrieve one at the end of the trial in response to a retro-cue. This task was sometimes interrupted with an arithmetic task that was presented before the retro-cue. The period after the interruptions and the retro-cue was either short (no additional time), long (additional 1000 ms), or self-determined. Interruptions affected the main task performance irrespective of duration condition, while response times were shorter with the flexible condition. EEG analysis showed that having more time before resuming the interrupted task enabled stronger beta suppression which in turn modulated task performance, helping participants to safely disengage from the interrupting task, and refocus their attention back more efficiently. Further, flexibility in the timing of resumption provided additional benefits as seen in stronger oscillatory alpha and beta suppression to the retro-cue, also being related to better task performance. These results demonstrate the important role of resumption time and individual flexibility in dealing with interruptions.

neuroscience↗

Working memory processing boosts the retrieval of existing long-term memory representations

Understanding the interaction between short-term and long-term memory systems is essential for advancing our knowledge of human memory. This study investigates whether working memory processes, specifically attentional prioritization (Experiments 1 and 2) and testing (Experiment 2), can enhance the neural activity associated with recently encoded long- term memories. A total of 86 participants completed a novel three-phase memory task that integrated a traditional long-term memory learning task with a working memory paradigm. In the first phase, participants encoded object-location associations. During the second phase, these associations were reintroduced in a working memory task that manipulated attentional prioritization; participants were required to report the location of the cued object. In the final phase, participants recalled the locations associated with each object. By analyzing both behavioral performance and electroencephalogram (EEG) data collected during this retrieval phase, we found that attentional prioritization in working memory significantly improved long- term memory retrieval, a finding supported by corresponding neural evidence. Additionally, Experiment 2 demonstrated that both prioritization and testing in working memory jointly enhance the neural representation of long-term memories. These findings indicate that working memory processes can dynamically alter the neural patterns underlying long-term memory representations, revealing a more integrated role for working memory in long-term memory consolidation.

neuroscience↗

The effect of performance contingent reward prospects flexibly adapts to more versus less specific task goals

In some situations, e.g., when we expect to gain a reward in case of good performance, goal-driven top-down attention is particularly strong. Little is known about the task specificity of such increases of top-down attention due to environmental factors. To understand to what extent performance-contingent reward prospects can result in specific and unspecific changes in cognitive processing, we here investigate reward effects under different levels of task specification. Thirty-two participants performed a visual or an auditory discrimination task cued by two consecutive visual stimuli: First, a reward cue indicated if good performance was rewarded. Second, a task cue announced either which of the two tasks would follow (precise cue) or that both tasks would follow equally likely (imprecise cue). Reward and task cue preciseness both significantly improved performance. Moreover, the response time difference between precisely and imprecisely cued trials was significantly stronger in rewarded than in unrewarded trials. These effects were reflected in ERP slow wave amplitudes: Reward and preciseness both significantly enhanced the contingent negative variation (CNV) prior to the task stimulus. In an early CNV time interval, both factors also showed an interaction. A negative slow wave prior to the task cue was also significantly enhanced for rewarded trials. This effect correlated with the reward difference in response times. These results indicate that reward prospects trigger task-specific changes in preparatory top-down attention which can flexibly adapt over time and across different task requirements. This highlights that a reward-induced increase of cognitive control can occur on different specificity levels.

neuroscience↗

Structural basis for Vipp1 membrane binding: From loose coats and carpetsto ring and rod assemblies

Vipp1 (also known as IM30) is essential in most oxygenic photoautotrophic organisms. It is involved in membrane remodeling and fusion and is critical for thylakoid membrane biogenesis and maintenance. Vipp1 has recently been identified as a member of the ESCRT-III superfamily of membrane remodeling proteins, albeit it still is elusive how Vipp1 interacts with and finally remodels membranes. Here we present a series of cryo-EM structures of cyanobacterial Vipp1 interacting with bacterial membranes: first, we solved seven structures between 5 and 7 [A] resolution of three unique helical and four types of stacked-ring assemblies engulfing membranes, and, second, using sub-tomogram averaging, we determined three [~]20 [A] resolution structures compatible with previously observed carpet structures at three different membrane curvatures. By analyzing ten additional unique structures of N-terminally truncated Vipp1, we could show that helix 0 is essential for membrane tubulation and forms the membrane anchoring domain of Vipp1. Using a conformation-restrained Vipp1 mutant, we were able to reduce the structural plasticity of Vipp1 assemblies in the presence of lipids and determined two structures of Vipp1 at 3.0 [A] resolution, resolving the molecular details of membrane anchoring and intersubunit contacts of helix 0. Our data reveal the molecular details of how Vipp1 interacts with membranes, showing membrane curvature-dependent structural transitions from carpets to rings and rods, some of which are capable of inducing and/or stabilizing high local membrane curvature triggering membrane fusion. SummaryBacterial ESCRT-III family member Vipp1 forms membrane-bound coats, carpets, ring complexes, stacked-ring assemblies and helical tubes capable of internalizing lipids and inducing high membrane curvature.

biophysics↗

Structural plasticity of bacterial ESCRT-III protein PspA in higher-orderassemblies

Eukaryotic members of the endosome sorting complex required for transport III (ESCRT-III) family have been shown to form diverse oligomeric assemblies. The bacterial phage shock protein A (PspA) has recently been identified as a bacterial member of the ESCRT-III superfamily, and monomeric PspA homo-oligomerizes to form large rod-shaped assemblies. As observed for eukaryotic ESCRT-III, PspA forms different tubular assemblies with varying diameters. Using electron cryo-microscopy (cryo-EM), we determined a total of 61 PspA structures and observed in molecular detail how structural plasticity of PspA rods is mediated by conformational changes at three hinge regions in the monomer and by the fixed as well as changing molecular contacts between protomers. Moreover, we reduced and increased the structural plasticity of PspA rods by removing the loop connecting helices 3/4 and the addition of nucleotides, respectively. Based on our analysis of PspA-mediated membrane remodeling, we suggest that the observed mode of structural plasticity is a prerequisite for the biological function of ESCRT-III superfamily members. SummaryA series of cryo-EM structures of PspA rods with induced diameter modulations reveals the molecular basis of structural plasticity.

biophysics↗

Long-term imaging of three-dimensional hyphal development using the ePetri dish

Imaging three-dimensional microbial development and behavior over extended periods is crucial for advancing microbiological studies. Here, we introduce an upgraded ePetri dish system specifically designed for extended microbial culturing and 3D imaging, addressing the limitations of existing methods. Our approach includes a sealed growth chamber to enable long-term culturing, and a multi-step reconstruction algorithm that integrates 3D deconvolution, image filtering, ridge, and skeleton detection for detailed visualization of the hyphal network. The system effectively monitored the development of Aspergillus brasiliensis hyphae over a seven-day period, demonstrating the growth mediums stability within the chamber. The systems 3D imaging capability was validated in a volume of 5.5 mm x 4 mm x 0.5 mm, revealing a radial growth pattern of fungal hyphae. Additionally, we show that the system can identify potential filter failures that are undetectable with 2D imaging. With these capabilities, the upgraded ePetri dish represents a significant advancement in long-term 3D microbial imaging, promising new insights into microbial development and behavior across various microbiological research areas.

microbiology↗

The Interplay Between Multisensory Processing and Attention in Working Memory: Behavioral and Neural Indices of Audio-Visual Object Storage

Although real-life events are multisensory, how audio-visual objects are stored in working memory is an open question. At a perceptual level, evidence shows that both top-down and bottom-up attentional processes can play a role in multisensory interactions. To understand how attention and multisensory processes interact in working memory, we designed an audio-visual delayed match-to-sample task in which participants were presented with one or two audio-visual memory items, followed by an audio-visual probe. In three different blocks, participants were instructed to either (a) attend to the auditory features, (b) attend to the visual features, or (c) attend to both auditory and visual features. Participants were instructed to indicate whether the task-relevant features of the probe matched one of the task-relevant feature(s) or objects in working memory. Behavioral results showed interference from task-irrelevant features, suggesting bottom-up integration of audio-visual features and their automatic encoding into working memory, irrespective of their task relevance. Yet, ERP analyses revealed no evidence for active maintenance of these task-irrelevant features, while they clearly taxed greater attentional resources during recall. Notably, alpha oscillatory activity revealed that linking information between auditory and visual modalities required more attentional demands at retrieval. Overall, these results offer critical insights into how and at which processing stage multisensory interactions occur in working memory. Public Significance StatementCurrent working memory research is dominated by investigations of the visual domain. Yet, understanding how more complex representations, e.g., based on multisensory inputs, are formed, stored, and recalled is crucial to obtaining a more realistic understanding of working memory function. The present study shows that when confronted with audio-visual inputs at the same time and location, features from both modalities are combined into a working memory representation, irrespective of their task relevance. During maintenance, alpha oscillations serve to flexibly gate information flow in the cortex, allowing for the re-distribution of attentional resources between modalities depending on their task-relevance. Notably, when the task instructions explicitly involve the storage of audio-visual objects as a whole, recall requires more attentional resources.

neuroscience↗

Direct and culture-independent detection of low-abundant Clostridioides difficile in environmental DNA via PCR

Clostridioides difficile represents a major burden to public health. As a well-known nosocomial pathogen whose occurrence is highly associated with antibiotic treatment, most examined C. difficile strains originated from clinical specimen and were isolated under selective conditions emplyoing antibiotics. This suggests a significant bias among analysed C. difficile strains, which impedes a holistic view on this pathogen. In order to support extensive isolation of C. difficile strains from environmental samples, we designed a detection PCR that targets the hpdBCA operon and thereby identifies low abundances of C. difficile in environmental samples. Amplicon-based analyses of diverse environmental samples demonstrated that the designed PCR is highly specific for C. difficile and successfully detected C. difficile despite its absence in general 16S rRNA gene-based detection strategies. Further analyses revealed the potential of the hpdBCA detection PCR sequence for initial phylogenetic classification, which allows assessing C. difficile diversity in environmental samples via amplicon sequencing. Our findings furthermore showed that C. difficile strains isolated under antibiotic treatment from environmental samples were originally dominated by other strains according to detection PCR amplicon results. This provided evidence for selective cultivation of under-represented but antibiotic-resistant isolates. Thereby, we revealed a substantial bias in C. difficile isolation and research. ImportanceClostridioides difficile is mainly responsible for hospital-acquired infections after antibiotic treatment with serious morbidity and mortality worldwide. Research on this pathogen and its virulence focused on bacterial isolation from clinical specimen under antibiotic treatment, which implies a substantial bias in isolated strains. Comprehensive studies however require an unbiased strain collection, which is accomplished by isolation of C. difficile from diverse environmental samples and avoiding antibiotic-based enrichment strategies. Thus, isolation can significantly benefit from our C. difficile-specific detection PCR, which rapidly verifies C. difficile presence in environmental samples and further allows estimation of the C. difficile diversity by using NGS.

microbiology↗

Pan-genome analysis of six complete Paracoccus type strain genomes from hybrid next generation sequencing

The genus Paracoccus capable of inhabiting a variety of different ecological niches both, marine and terrestrial is globally distributed. In addition, Paracoccus is taxonomically, metabolically and regarding lifestyle highly diverse. Until now, little is known on how Paracoccus can adapt to such a range of different ecological niches and lifestyles. In the present study, the genus Paracoccus was phylogenomically analyzed (n = 160) and revisited, allowing species level classification of 16 so far unclassified Paracoccus sp. strains and detection of five misclassifications. Moreover, we performed pan-genome analysis of Paracoccus-type strains, isolated from a variety of ecological niches, including different soils, tidal flat sediment, host association such as the bluespotted cornetfish, Bugula plumosa, and the reef-building coral Stylophora pistillata to elucidate either i) the importance of lifestyle and adaptation potential, and ii) the role of the genomic equipment and niche adaptation potential. Six complete genomes were de novo hybrid assembled using a combination of short and long-read technologies. These Paracoccus genomes increase the number of completely closed high-quality genomes of type strains from 15 to 21. Pan-genome analysis revealed an open pan-genome composed of 13,819 genes with a minimal chromosomal core (8.84 %) highlighting the genomic adaptation potential and the huge impact of extra-chromosomal elements. All genomes are shaped by the acquisition of various mobile genetic elements including genomic islands, prophages, transposases, and insertion sequences emphasizing their genomic plasticity. In terms of lifestyle, each mobile genetic elements should be evaluated separately with respect to the ecological context. Free- living genomes, in contrast to host-associated, tend to comprise (1) larger genomes, or the highest number of extra-chromosomal elements, (2) higher number of genomic islands and insertion sequence elements, and (3) a lower number of intact prophage regions. Due to the vast number of adaptive genes, Paracoccus can quickly adapt to changing environmental conditions.

microbiology↗

Remembering what is relevant: how is goal-directed memory reactivation supported by attention and working memory?

Goal-directed memory reactivation involves retrieving the most relevant information for the current behavioral goal. Previous research has linked this process to activations in the fronto-parietal network, but the underlying selection mechanisms remain poorly understood. The current electroencephalogram (EEG) study investigates attention as a possible mechanism supporting goal-directed retrieval. Participants learned associations between objects and two screen locations in an episodic long-term memory experiment. In a following phase, we changed the relevance of some locations to simulate goal-directed retrieval. This was subsequently contrasted to a control condition, in which the original associations remained unchanged. Behavior performance measured during final retrieval revealed faster and more confident responses in the selective vs. neutral condition. At the EEG level, we found significant differences in decoding accuracy, with above-chance effects in the selective cue condition but not in the neutral cue condition. Additionally, we observed a stronger posterior contralateral negativity and lateralized alpha power in the selective cue condition. Overall, these results suggest that attentional selection enhances task-relevant information accessibility, emphasizing its role in goal-directed memory retrieval.

neuroscience↗

Phosphatidylserine-exposing medium/large extracellular vesicles: potential cancer biomarkers

Under physiological conditions, phosphatidylserine (PS) predominantly localizes to the cytosolic leaflet of the plasma membrane of cells. During apoptosis, PS is exposed on the cell surface and serves as an "eat-me" signal for macrophages to prevent releasing self-immunogenic cellular components from dying cells which could potentially lead to autoimmunity. However, increasing evidence indicates that viable cells can also expose PS on their surface. Interestingly, tumor cell-derived extracellular vesicles (EVs) also externalize PS. Recent studies have proposed PS-exposing EVs as a potential biomarker for the early detection of cancer and other diseases. However, there are confounding results regarding subtypes of PS-positive EVs, and knowledge of PS exposure on the EV surface requires further elucidation. In this study, we enriched small EVs (sEVs) and medium/large EVs (m/lEVs) from conditioned media of breast cancer cells (MDA-MB-231, MDA-MB-468) and non-cancerous cells (keratinocytes, fibroblasts). Since several PS-binding molecules are available to date, we compared recombinant proteins of annexin A5 and the carboxylated glutamic acid domain of Protein S (GlaS), also specific for PS, to detect PS-exposing EVs. Firstly, PS externalization in each EV fraction was analyzed using a bead-based EV assay, which combines EV capture using microbeads and analysis of PS-exposing EVs by flow cytometry. The bulk EV assay showed higher PS externalization in m/lEVs derived from MDA-MB-468 cells but not from MDA-MB-231 cells, while higher binding of GlaS was also observed in m/lEVs from fibroblasts. Second, using single EV flow cytometry, PS externalization was also analyzed on individual sEVs and m/lEVs. Significantly higher PS externalization was detected in m/lEVs (annexin A1+) derived from cancer cells compared to m/lEVs (annexin A1+) from non-cancerous cells. These results emphasize the significance of PS-exposing m/lEVs as an undervalued EV subtype for early cancer detection and provide a better understanding of PS externalization in disease-associated EV subtypes.

cancer biology↗

Cross-modal interactions at the audiovisual cocktail-party revealed by behavior, ERPs, and neural oscillations

Theories of attention argue that objects are the units of attentional selection. In real-word environments such objects can contain visual and auditory features. To understand how mechanisms of selective attention operate in multisensory environments, we created an audiovisual cocktail-party situation, in which two speakers (left and right of fixation) simultaneously articulated brief numerals. In three separate blocks, informative auditory speech was presented (a) alone or paired with (b) congruent or (c) uninformative visual speech. In all blocks, subjects localized a pre-defined numeral. While audiovisual-congruent and uninformative speech improved response times and speed of information uptake according to diffusion modeling, an ERP analysis revealed that this did not coincide with enhanced attentional engagement. Yet, consistent with object-based attentional selection, the deployment of auditory spatial attention (N2ac) was accompanied by visuo-spatial attentional orienting (N2pc) irrespective of the informational content of visual speech. Notably, an N2pc component was absent in the auditory-only condition, demonstrating that a sound-induced shift of visuo-spatial attention relies on the availability of audio-visual features evolving coherently in time. Additional analyses revealed cross-modal interactions in working memory and modulations of cognitive control. The preregistered methods and hypotheses of this study can be found at https://osf.io/vh38g.

neuroscience↗

Task prioritization modulates low frequency EEG dynamics reflecting proactive cognitive control

Most neuroscientific studies investigating mental effort apply unspecific effort allocation paradigms. In contrast, the present EEG study targets specific effort allocation during task prioritization. Twenty-eight participants performed a cued number classification task during the retention interval of a working memory task including retrospective cues. One of two possible number classifications was done per trial. Each trial started with a cue indicating which of the two tasks would be more important in the upcoming trial. Subjects were told to engage in both tasks, but to concentrate on the important one. Feedback given at the end of each trial was calculated based on task performance, with scores obtained from the relevant task being tripled. Participants performed significantly better in either task when it was important compared to when not.Task prioritization modulates theta, alpha and beta oscillations, predominantly during task preparation. Multivariate pattern analysis revealed that the exact type of the two possible number classifications was decodable, however, decoding accuracy did not depend on task importance. Hemispheric alpha power asymmetries indicating attentional orienting between working memory representations also did not depend on task importance. The findings suggest that task prioritization primarily affects proactive cognitive control on a superordinate level.

neuroscience↗

Age influences audiovisual speech processing in multi-talker scenarios - Evidence from cortical oscillations

Age-related differences in the processing of audiovisual speech in a multi-talker environment were investigated analyzing event-related spectral perturbations (ERSPs), focusing on theta, alpha, and beta oscillations that are assumed to reflect conflict processing, multisensory integration, and attentional mechanisms, respectively. Eighteen older and 21 younger healthy adults completed a two-alternative forced-choice word discrimination task, responding to audiovisual speech stimuli. In a cocktail-party scenario with two competing talkers (located at-15{degrees} and 15{degrees} azimuth), target words (/yes/ or /no/) appeared at a pre-defined (attended) position, distractor words at the other position. In two audiovisual conditions, acoustic speech was combined either with congruent or uninformative visual speech. While a behavioral benefit for congruent audiovisual speech occurred for both age groups, differences between audiovisual conditions in the theta and beta band were only present for older adults. A stronger increase in theta perturbations for stimuli containing uninformative visual speech could be associated with early conflict processing, while a stronger suppression in beta perturbations for congruent audiovisual speech could be associated to audiovisual integration. Compared to the younger group, the older group showed generally stronger beta perturbations. No condition differences in the alpha band were found. Overall, the findings suggest age-related differences in audiovisual speech integration in a multi-talker environment. While the behavioral benefit of congruent audiovisual speech was unaffected by age, older adults had a stronger need for cognitive control when processing conflicting audiovisual speech input. Furthermore, mechanisms of audiovisual integration are differently activated depending on the informational content of the visual information.

neuroscience↗

Evolution of bacterial persistence to antibiotics during a 50,000-generation experiment in an antibiotic-free environment.

Failure of antibiotic therapies causes > 700,000 deaths yearly and involves both bacterial resistance and persistence. Persistence results in the relapse of infections by producing a tiny fraction of pathogen survivors that stay dormant during antibiotic exposure. From an evolutionary perspective, persistence is either a bet-hedging strategy that helps to cope with stochastically changing environments or an unavoidable minimal rate of cellular errors that lock the cells in a low activity state. Here, we analyzed the evolution of persistence over 50,000 bacterial generations in a stable environment by improving a published method that estimates the number of persister cells based on the growth of the reviving population. Our results challenged our understanding of the factors underlying persistence evolution. In one case, we observed a substantial decrease in persistence proportion, suggesting that the naturally observed persistence level is not an unavoidable minimal rate of cellular errors. However, although there was no obvious environmental stochasticity, in 11 of the 12 investigated populations, the persistence level was maintained during 50,000 bacterial generations.

evolutionary biology↗

Pattern reinstatement and attentional control: overlapping processes during episodic long-term memory retrieval

Episodic long-term memory (eLTM) retrieval involves the reinstatement of neural patterns from the encoding phase. However, recent evidence suggests that comparable effects on cortical activity patterns can also be linked to attentional control processes on the level of memory representations. The current investigation assesses these two processes independently based on alpha-beta-band activity in the electroencephalogram (EEG). During encoding, subjects were presented with an object on a certain position on the screen and had to imagine it on a new position. In each trial, either the task-irrelevant presentation position or the task- relevant imagination position was lateralized. In the retrieval phase, subjects first made an old/new judgement based on centrally presented objects and then reported the imagination position. Pattern reinstatement should be reflected in similar lateralized alpha-beta activity during encoding and retrieval. Conversely, the influence of attentional control processes during retrieval would be associated with the suppression of alpha-beta power contralateral to the to-be-reported imagination position and with the increase of activity contralateral to the irrelevant presentation position. Our results support this latter pattern. This shows that an experimental differentiation between selective attention and pattern reinstatement processes is necessary when studying the neural basis of eLTM retrieval on cortical level.

neuroscience↗

Preparing for the unknown: How working memory provides a link between perception and anticipated action

What mechanisms underlie the transfer of a working memory representation into a higher-level code for guiding future actions? Electrophysiological correlates of attentional selection and motor preparation processes within working memory were investigated in two retrospective cuing tasks. In the first experiment, participants stored the orientation and location of a grating. Subsequent feature cues (selective vs. neutral) indicated which feature would be the target for later report. The oscillatory response in the mu and beta frequency range with an estimated source in the sensorimotor cortex contralateral to the responding hand was used as correlate of motor preparation. Mu/beta suppression was stronger following the selective feature cues compared to the neutral cue, demonstrating that purely feature-based selection is sufficient to form a prospective motor plan. In the second experiment, another retrospective cue was included to study whether knowledge of the task at hand is necessary to initiate motor preparation. Following the feature cue, participants were cued to either compare the stored feature(s) to a probe stimulus (recognition task) or to adjust the memory probe to match the target feature (continuous report task). An analogous suppression of mu oscillations was observed following a selective feature cue, even ahead of task specification. Further, a subsequent selective task cue again elicited a mu/beta suppression, which was stronger after a continuous report task cue. This indicates that working memory is able to flexibly store different types of information in higher-level mental codes to provide optimal prerequisites for all required action possibilities. Highlights* Selectively cueing features results in an overall performance benefit * Feature-based attention is sufficient to form a prospective motor plan * Prospective motor preparation can be initiated ahead of task specification * Retro-active task specification leads to forming of higher-level action codes * Different tasks requirements result in different prospective action plans

neuroscience↗

Aging impairs primary task resumption and attentional control processes following interruptions

Attentional selection of working memory content is impaired after an interruption. This effect was shown to increase with age. Here we investigate how electrophysiological mechanisms underlying attentional selection within working memory differ during primary task resumption between younger and older adults. Participants performed a working memory task, while being frequently interrupted with either a cognitively low- or high-demanding arithmetic task. Afterwards, a retrospective cue (retro-cue) indicated the working memory content required for later report. The detrimental effect of the interruption was evident in both age groups, but while younger adults were more strongly affected by a high-than by a low-demanding interruption, the performance deficit appeared independently of the cognitive requirements of the interruption task in older adults. A similar pattern was found regarding frontal-posterior connectivity in the theta frequency range, suggesting that aging decreases the ability to selectively maintain relevant information within working memory. The power of mid-frontal theta oscillations (4-7 Hz) featured a comparable effect of interruptions in both age groups. How-ever, posterior alpha power (8-14 Hz) following the retro-cue was more diminished by a preceding interruption in older adults. These results suggest an age-related deficit in the atten-tional selection and maintenance of primary task information following an interruption that appeared independent from the cognitive requirements of the interrupting task.

neuroscience↗