Biology subjects

Santabarbara, S.

Publications and source records attributed to Santabarbara, S..

3 recordsLinked to original sources

bioRxiv2026

Bidirectional Electron Transfer in Far-Red-Light Adapted Photosystem I. Implications for the Photosystem's Functionality

Far-Red (FR) Light Photoacclimation (FaRLiP) enables cyanobacteria to extend photosynthetic activity into the far-red region by extensively remodelling Photosystem I (PSI), including the replacement of several core subunits with paralogs that coordinate the red-shifted chlorophyll f (Chl f). The binding positions of Chls f are still a matter of debate, with the most recent structural findings supporting the location of a single Chl f molecule within the reaction centre (RC) at the so-called A-1B site. This was in turn suggested to strongly affect electron transfer (ET) directionality leading to an almost monodirectional transfer along the B branch in FR-PSI RC. Here, we directly probe ET in FR-PSI by characterising the photogenerated [P700A1-] spin-correlated radical pair using complementary pulse and Time-Resolved (TR) Electron Paramagnetic Resonance (EPR) spectroscopy at cryogenic temperature. Electron spin-echo decay kinetics are distinctly biexponential, indicating the formation of two charge-separated states. Consistently, out-of-phase ESEEM traces are quantitatively described by two modulation frequencies arising from different dipolar interactions, while TR-EPR spectra are accurately simulated by the combined contributions of [P700A1A-] and [P700A1B-] radical pairs. These results provide direct spectroscopic evidence that both the A and B branches remain photochemically active in FR-PSI. The conservation of bidirectional ET, even when considering the presence of a single Chl f molecule in the RC, further implies that the two radical pairs originate from a common primary electron donor. This finding identifies P700 as the most likely primary donor and argues against a mechanism in which the RC Chl f initiates charge separation.

biophysics↗

bioRxiv2025

The Recombination Triplet State in the Far-Red Light Adapted Photosystem II is Located at the ChlD1 Site and Resides on the Red-Most Chlorophyll of the Reaction Center.

The energetic limits of Photosystem II (PSII) photochemical reactivity required reconsideration after the discovery of far-red light acclimation responses in cyanobacteria. Insights on PSII functionality following the inclusion of the red shifted Chlorophylls d and f can be obtained by extending the current knowledge on spectroscopic and structural properties of its reaction center (RC). The photo-induced triplet states, that represent selective endogenous probes, were therefore investigated in far-red adapted PSII by magnetic resonance techniques. Zero-field splitting tensor analysis combined with spin-polarization dynamics arising from radical pair recombination unambiguously identify an intrinsically low-energy-absorbing chlorophyll participating to charge separation reactions. The triplet-minus-singlet (T-S) spectrum associated to the recombination triplet state, obtained by microwave selection, showed a sharp 725 nm bleaching demonstrating the dominant involvement of this red-shifted chlorophyll in the lowest RC exciton. Moreover, spectral simulations provided strong evidence in favor of its localization at the ChlD1 position, making it the most likely site of primary photochemistry.

biochemistry↗

bioRxiv2022

Impact of energy limitations on function and resilience in long-wavelength Photosystem II

Photosystem II (PSII) uses the energy from red light to split water and reduce quinone, an energy-demanding process based on chlorophyll a (Chl-a) photochemistry. Two kinds of cyanobacterial PSII can use Chl-d and Chl-f to perform the same reactions using lower energy, far-red light. PSII from Acaryochloris marina has Chl-d replacing all but one of its 35 Chl-a, while PSII from Chroococcidiopsis thermalis, a facultative far-red species, has just 4 Chl-f and 1 Chl-d and 30 Chl-a. From bioenergetic considerations, the far-red PSII were predicted to lose photochemical efficiency and/or resilience to photodamage. Here, we compare enzyme turnover efficiency, forward electron transfer, back-reactions and photodamage in Chl-f-PSII, Chl-d-PSII and Chl-a-PSII. We show that: i) all types of PSII have a comparable efficiency in enzyme turnover; ii) the modified energy gaps on the acceptor side of Chl-d-PSII favor recombination via PD1+Phe- repopulation, leading to increased singlet oxygen production and greater sensitivity to high-light damage compared to Chl-a-PSII and Chl-f-PSII; ii) the acceptor-side energy gaps in Chl-f-PSII are tuned to avoid harmful back reactions, favoring resilience to photodamage over efficiency of light usage. The results are explained by the differences in the redox tuning of the electron transfer cofactors Phe and QA and in the number and layout of the chlorophylls that share the excitation energy with the primary electron donor. PSII has adapted to lower energy in two distinct ways, each appropriate for its specific environment but with different functional penalties.

biochemistry↗