Biology subjects

Samelius, G.

Publications and source records attributed to Samelius, G..

4 recordsLinked to original sources

bioRxiv2026

Mortality causes and annual survival rates of red foxes (Vulpes vulpes).

Mortality causes and survival rate estimates from individual follow-ups of GPS-collared animals provide reliable demographic data, but such estimates are rare for red foxes Vulpes vulpes. We used data from 126 GPS-collared red foxes tracked between 2011 and 2019 across a latitudinal gradient in central Sweden and Norway to quantify mortality causes and estimate annual survival probabilities using the Andersen-Gill extension of the Cox proportional hazards model. Hunting was the dominant mortality cause (63%), followed by vehicle collisions (14%), stress or malnutrition (11%), sarcoptic mange (9%), and predation (3%). Annual survival was 0.58 for adults and 0.32 for subadults. Subadults had approximately twice the hazard of adults, males had elevated hazard relative to females, and mortality risk was highest in autumn and early winter. These collar-based estimates are strikingly similar to mark-recovery estimates from the same region nearly five decades earlier, despite an intervening population collapse from sarcoptic mange, subsequent full recovery, and a major decline in harvest pressure. This convergence is consistent with density-dependent regulation at a food-determined and food-limited carrying capacity, suggesting that current harvest levels are not limiting the population. Furthermore, human-caused mortality was approximately four times greater than natural mortality, illustrating that living in close proximity to humans -- which often favours generalist predators such as red foxes -- may also come at a cost of increased mortality risk. Developing validated census methods for red foxes in boreal Scandinavia is identified as a key priority for quantitative population management.

ecology↗

bioRxiv2026

Latitudinal effects on weight and age-dependent survival of red fox Vulpes vulpes

Age-dependent survival is central to understanding population dynamics and life-history evolution. We analysed carcass weight and age-at-harvest data from 6 022 red foxes (Vulpes vulpes) collected across Sweden between 1967 and 1971 to evaluate latitudinal effects on body mass and age-dependent survival. Carcass weights decreased from south to north in both adults and sub-adults, contrary to Bergmanns rule, with southern foxes weighing approximately 1.27 times more than northern foxes. The latitudinal weight gradient exceeded the sex difference in both age classes, and no sex x region interaction was detected. The decrease in weight with latitude is consistent with reduced prey availability and harsher winter conditions in the north, which limit growth and body size during development. Using a Bayesian age-at-harvest model with region-specific population growth rates ({lambda}), we estimated age-dependent survival probabilities for four latitudinal regions and both sexes. Despite the strong latitudinal gradient in weight, survival did not show a corresponding pattern -- regional differences were uncertain, with all credible intervals spanning zero. Regional population growth rates were consistent with slight decline in the north and near-stability in the south-central region, which suggests that body condition and population dynamics are coupled at the regional scale despite no survival gradient. The decoupling of body condition and survival across regions suggests that mortality patterns are similar across the latitudinal gradient. We discuss these patterns in terms of latitudinal productivity gradients, prey availability, and life-history trade-offs in a widely distributed carnivore.

ecology↗

bioRxiv2023

Extreme in Every Way: Exceedingly Low Genetic Diversity in Snow Leopards Due to Persistently Small Population Size

Snow leopards (Panthera uncia) serve as an umbrella species whose conservation benefits their high-elevation Asian habitat. Their numbers are believed to be in decline due to numerous Anthropogenic threats; however, their conservation is hindered by numerous knowledge gaps. They are the least studied genetically of all big cat species with more to learn regarding their population structure, historical population size, and current levels of genetic diversity. Here, we use whole-genome sequencing data for 41 snow leopards (37 newly sequenced) to offer new insights into these unresolved questions. Among our samples, we find evidence of a primary genetic divide between the northern and southern part of the range around the Dzungarian Basin, as previously identified, and a secondary divide south of Kyrgyzstan around the Taklamakan Desert. Most noteworthy, we find that snow leopards have the lowest genetic diversity of any big cat species, due to a persistently small population size (relative to other big cat species) throughout their evolutionary history rather than recent inbreeding. Without a large population size or ample standing genetic variation to help buffer them from any forthcoming Anthropogenic challenges, snow leopard persistence may be more tenuous than currently appreciated.

evolutionary biology↗

bioRxiv2022

Chromosome-level draft assemblies of the snow leopard, African leopard, and tiger (Panthera uncia, Panthera pardus pardus, and Panthera tigris)

The big cats (genus Panthera) represent some of the most popular and charismatic species on the planet. Although some reference genomes are available for this clade, few are at the chromosome level, inhibiting high-resolution genomic studies. Here, we assemble genomes from three members of the genus, the tiger (Panthera tigris), the snow leopard (Panthera uncia), and the African leopard (Panthera pardus pardus), at chromosome or near-chromosome level. We used a combination of short- and long-read technologies, as well as proximity ligation data from Hi-C technology, to achieve high continuity and contiguity for each individual. We hope these genomes will aid in further evolutionary and conservation research of this iconic group of mammals.

genomics↗