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Biology subjects

Saldana, A.

Publications and source records attributed to Saldana, A..

3 recordsLinked to original sources

Forest fragmentation, anthropogenic land use, and climate shape sand fly community composition in central Panama.

Background: American cutaneous leishmaniasis (ACL) is endemic in central Panama, where rapid land use change is transforming tropical landscapes and potentially altering the ecology of sand fly vectors. Although researchers have widely studied environmental determinants of individual vector species, community-level responses of sand fly assemblages to landscape modification remain poorly understood. We evaluated how landscape composition, fragmentation, climate, and topography influence sand fly community structure in a rural landscape of central Panama. Methodology/Principal Findings: We combined metacommunity analyses with joint species distribution models (JSDMs) to quantify species-specific and community-level responses to climatic variables, land-cover composition, and forest configuration. We collected 1,692 individuals representing 30 species, including nine anthropportunist taxa of epidemiological importance. Sand fly assemblages had strong nestedness, low species turnover, and predominantly positive residual associations. Several anthropportunist sand fly species occurred across heterogeneous landscapes, although their responses to environmental conditions differed among taxa. Land-cover composition, forest fragmentation metrics, and elevation together explained about half of the variance in species occurrence and abundance, with the remainder attributed to climate and spatial, temporal, and community-level random effects. Grassland cover contributed most strongly to sand fly occurrence and abundance, whereas artificial surfaces consistently reduced both metrics. Fragmentation effects varied by species: edge density often increased occurrence and abundance, whereas more forest patches generally suppressed populations. Increased precipitation broadly enhanced occurrence and abundance, whereas higher temperatures negatively affected several taxa. Conclusions/significance: Landscape heterogeneity predictably structures sand fly communities, and different forms of anthropogenic disturbance exert non-uniform effects on vector assemblages. The nested organization of these assemblages and the co-occurrence of several anthropophilic species suggest that multiple potential vector species may be present across heterogeneous landscapes. These findings highlight the need for landscape-informed surveillance and control strategies that prioritize grassland-forest interfaces and other disturbed ecotones where sand fly species of epidemiological importance frequently co-occur.

ecology↗

Environmental versus litter traits as drivers of microbial decomposer functions

Plant litter decomposition is a key ecosystem process with significant implications for global carbon cycling, soil fertility and plant productivity. Given that microbial decomposers are the main players in the decomposition process, it is surprising how little is known about their functional diversity in different habitats or their ability to respond to environmental changes. To fill this knowledge gap, we conducted a litterbag decomposition experiment along a pronounced climate and vegetation gradient in the Chilean Coastal Cordillera (26{degrees}S to 38{degrees}S), ranging from hyper-arid to temperate, using mixtures of four plant species, native to the respective ecosystems. We analyzed potential decomposition functions of bacterial and fungal litter communities along with their biotic (litter traits) and abiotic (meteorological conditions and soil properties) environments, to determine the relative importance of these environmental factors for microbial community functioning. We also tested the impact of the functional diversity of the decomposer communities (i.e., the diversity of decomposition related functions) on litter mass loss. Functional composition was related most strongly to the temporal variation of precipitation and radiation, explaining about 19 % and 6 % of variation in bacteria and fungi, respectively. In contrast, functional diversity was quite strongly related to litter chemical traits (C:N, C:P, tannins, phenols). Litter mass loss after six months of decomposition was not correlated to the functional diversity of decomposer communities but increased with the presence of habitat generalists like Proteobacteria, Actinobacteria, Firmicutes, and Bacteroidetes. Taken together, these results highlight i) the interplay between abiotic factors and chemical litter traits on litter microbial functions and functional diversity and ii) the importance of microbial generalists for litter decomposition across different ecosystems. These results enhance our ability to predict changes in microbial decomposer communities and litter decomposition under future climate-change scenarios.

ecology↗

Repeat-driven generation of antigenic diversity in a major human pathogen, Trypanosoma cruzi

Trypanosoma cruzi, a zoonotic kinetoplastid protozoan with a complex genome, is the causative agent of American trypanosomiasis (Chagas disease). The parasite uses a highly diverse repertoire of surface molecules, with roles in cell invasion, immune evasion and pathogenesis. Thus far, the genomic regions containing these genes have been impossible to resolve and it has been impossible to study the structure and function of the several thousand repetitive genes encoding the surface molecules of the parasite. We here present an improved genome assembly of a T. cruzi clade I (TcI) strain using high coverage PacBio single molecule sequencing, together with Illumina sequencing of 34 T. cruzi TcI isolates and clones from different geographic locations, sample sources and clinical outcomes. Resolution of the surface molecule gene structure reveals an unusual duality in the organisation of the parasite genome, a core genomic region syntenous with related protozoa flanked by unique and highly plastic subtelomeric regions encoding surface antigens. The presence of abundant interspersed retrotransposons in the subtelomeres suggests that these elements are involved in a recombination mechanism for the generation of antigenic variation and evasion of the host immune response. The comparative genomic analysis of the cohort of TcI strains revealed multiple cases of such recombination events involving surface molecule genes and has provided new insights into T. cruzi population structure.

genomics↗