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Saez, S.

Publications and source records attributed to Saez, S..

2 recordsLinked to original sources

CSLB4-mediated cell wall remodeling decouples phloem access from aphid performance in Arabidopsis thaliana

The plant cell wall (CW) is a key determinant of plant defense; however, the extent to which natural variation in CW architecture contributes to resistance against phloem-feeding insects remains unclear. Here, we combined genome-wide association studies (GWAS) with functional analyses to identify genetic determinants of resistance against the specialist aphid Brevicoryne brassicae in Arabidopsis thaliana. GWAS conducted on 200 natural accessions identified a single locus on chromosome 2 associated with aphid performance. Integration of haplotype and epidermis-specific expression data prioritized CSLB4, a member of the cellulose synthase-like B family. Loss-of-function cslb4 mutants showed reduced aphid offspring, indicating enhanced resistance to B. brassicae, whereas performance of the generalist aphid Myzus persicae was unaffected. Electrical penetration graph analyses revealed earlier phloem access on cslb4 mutants despite reduced performance, indicating a decoupling between phloem access and aphid success. Biochemical and immunolocalization analyses showed that CSLB4 disruption altered CW architecture, including increased xyloglucan epitope accessibility in mesophyll cell walls and reduced callose deposition upon aphid infestation. In addition, CSLB4 localized to Golgi-associated compartments, and in silico analyses are consistent with a role in non-cellulosic polysaccharide biosynthesis. Together, these findings identified CSLB4 as a modulator of CW architecture that uncouples phloem access from aphid performance. HighlightA GWAS identifies CSLB4 as a regulator of cell wall architecture that uncouples aphid-feeding from performance, revealing a new mechanism of plant resistance to specialist insects.

plant biology↗

A new improved and extended version of the multicell bacterial simulator gro

gro is a cell programming language developed in Klavins Lab for simulating colony growth and cell-cell communication. It is used as a synthetic biology prototyping tool for simulating multicellular biocircuits. In this work, we present several extensions made to gro that improve the performance of the simulator, make it easier to use and provide new functionalities. The new version of gro is between one and two orders of magnitude faster than the original version. It is able to grow microbial colonies with up to 105 cells in less than 20 minutes. A new library, CellEngine, accelerates the resolution of spatial physical interactions between growing and dividing cells by implementing a new shoving algorithm. A genetic library, CellPro, based on Probabilistic Timed Automata, simulates gene expression dynamics using simplified and easy to compute digital proteins. We also propose a more convenient language specification layer, ProSpec, based on the idea that proteins drive cell behavior. CellNutrient, another library, implements Monod-based growth and nutrient uptake functionalities. The intercellular signaling management was improved and extended in a library called CellSignals. Finally, bacterial conjugation, another local cell-cell communication process, was added to the simulator. To show the versatility and potential outreach of this version of gro, we provide studies and novel examples ranging from synthetic biology to evolutionary microbiology. We believe that the upgrades implemented for gro have made it into a powerful and fast prototyping tool capable of simulating a large variety of systems and synthetic biology designs.

synthetic biology↗