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Sadet, A.

Publications and source records attributed to Sadet, A..

2 recordsLinked to original sources

Long-lived coherences for magnetic interactions in proteins

Living systems rely on molecular building blocks of low symmetry such as amino-acids and nucleotides, which generally yield short-lived magnetic transitions in response to electromagnetic radiation. This is the first demonstration that in proteins of relatively large size local magnetic symmetry can be induced to enable the detection of interactions based on long-lived coherent transitions of nuclear spins. Long-lived coherences (LLCs) are superpositions of quantum states with singlet and triplet spin-permutation symmetries that feature significantly longer relaxation time constants compared to those of standard nuclear spin coherences. We report in this study that glycine residues in Lysozyme, a 14.3 kDa protein, feature Gly-H2,3 LLCs with relaxation time constants twice as long as the classical counterparts. Using a new excitation method for LLCs in glycines 4, 49, 54, 67, 117, and 126, Lysozyme Gly-H dipolar interactions with neighboring hydrogen spins were mapped in a high magnetic field - at 950 MHz 1H Larmor frequency. As predicted by theory, the positions of nearby atoms in the protein structure on one side or the other of Gly molecular symmetry planes reflecting protons H2,3 determines the signs of LLC magnetic interaction signals. LLC-based transfers therefore yield stereospecific signals from glycine residues to 1H neighboring atoms. The symmetry-encoded sign of the detected signals provides angle constraints, in addition to the distance information. LLC probes based on naturally-abundant 1H spins can be useful for in-cell spectroscopy, circumventing the introduction of heterogenous spin labels for following protein-ligand or protein-protein interactions in the natural environment. This is the first demonstration that magnetisation transfer through space from long-lived coherences can be obtained in proteins. Applications of LLCs were believed to be limited to systems featuring fast rotational motion in solution, mainly small molecules. This new LLC-based method yields stereospecific distance constraints and has the potential to extend the protein-size domain for the study of intra- and intermolecular interactions.

molecular biology↗

Magnetic resonance biomarkers for timely diagnostic of radiation dose-rate effects

Diagnostic of radiation effects can be obtained within hours from delivery relying on spectroscopic detection of cell metabolite concentrations. Clinical and pre-clinical studies show that radiation delivery with elevated dose-rates can achieve tumor suppression while minimizing toxicity to surrounding areas. Diagnostic biomarkers detected on short timescales are needed to orient high dose-rate radiation delivery. We have designed an 1H magnetic resonance approach to observe metabolite concentrations, in particular Choline, Creatine, and Lactate, in order to detect radiation dose and dose-rate effects within hours from radiation delivery. The results of our metabolic profiling method in glioblastoma cells are consistent with observations from clinical studies guided by magnetic resonance spectroscopy for radiotherapy of head tumors. At 5 Gy/min we have observed increases in lactate concentrations and decreases in [Cho]/[Cr] ratios at increasing radiation doses. An increase of the radiation dose-rate to 35 Gy/min is correlated with an increase of [Cho]/[Cr] consistent with a reduction in radiation-induced oxidative effects at high dose-rates. The observed biomarkers can be translated for radiation pulse sequences optimization. One Sentence SummaryMagnetic resonance biomarkers to monitor biological effectiveness within hours after radiation delivery can be optimized for glioblastoma cells and are of potential use for the design of radiotherapy with high dose-rates.

biophysics↗